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  1. Burkholderia pseudomallei, the etiological cause of melioidosis, is a soil saprophyte endemic in South-East Asia, where it constitutes a public health concern of high-priority. Melioidosis cases are sporadically ...

    Authors: Inbar Cohen-Gihon, Galia Zaide, Sharon Amit, Iris Zohar, Orna Schwartz, Yasmin Maor, Ofir Israeli, Gal Bilinsky, Ma’ayan Israeli, Shirley Lazar, David Gur, Moshe Aftalion, Anat Zvi, Adi Beth-Din, Erez Bar-Haim, Uri Elia…
    Citation: BMC Genomic Data 2024 25:47
  2. Primulina juliae has recently emerged as a novel functional vegetable, boasting a significant biomass and high calcium content. Various breeding strategies have been employed to the domestication of P. juliae. Ho...

    Authors: Yi Zhang, Endian Yang, Qin Liu, Jie Zhang and Chen Feng
    Citation: BMC Genomic Data 2024 25:46
  3. Bulb rot, a highly damaging disease of tulip plants, has hindered their profitable cultivation worldwide. This rot occurs in both field and storage conditions posing significant challenges. While this disease ...

    Authors: Qadrul Nisa, Gazala Gulzar, Mohammad Saleem Dar, Efath Shahnaz, Saba Banday, Zahoor A. Bhat, Mohamed A. El-Sheikh, Sajad Un Nabi, Vivak M. Arya, Ali Anwar and Sheikh Mansoor
    Citation: BMC Genomic Data 2024 25:40
  4. Cellular deconvolution is a valuable computational process that can infer the cellular composition of heterogeneous tissue samples from bulk RNA-sequencing data. Benchmark testing is a crucial step in the deve...

    Authors: Grant C. O’Connell
    Citation: BMC Genomic Data 2024 25:45
  5. China has thousands years of goat breeding and abundant goat genetic resources. Additionally, the Hainan black goat is one of the high-quality local goat breeds in China. In order to conserve the germplasm res...

    Authors: Yong Meng, Wencan Zhang, Yiwen Cheng, Yanru Wu, Haotian Wu, Meirong He, Si Chen, Churiga Man, Hongyan Gao, Li Du, Qiaoling Chen and Fengyang Wang
    Citation: BMC Genomic Data 2024 25:44
  6. Cadmium (Cd) is extremely toxic and non-essential for plants. Different soybean varieties differ greatly in their Cd accumulation ability, but little is known about the underlying molecular mechanisms.

    Authors: Xiaoqing Liu, Hongmei Zhang, Wei Zhang, Qianru Jia, Xin Chen and Huatao Chen
    Citation: BMC Genomic Data 2024 25:43
  7. Shallots are infected by various viruses like Onion yellow dwarf virus (OYDV), Leek yellow stripe virus (LYSV), Shallot latent virus (SLV) and Shallot virus X (ShVX). In India, they have been found to be persi...

    Authors: Jyoti Singh, Sachin Teotia, Ajay Kumar Singh, Meenakshi Arya, Ajaya Kumar Rout, Bijay Kumar Behera and Shahana Majumder
    Citation: BMC Genomic Data 2024 25:42
  8. Class III peroxidase (POD) enzymes play vital roles in plant development, hormone signaling, and stress responses. Despite extensive research on POD families in various plant species, the knowledge regarding t...

    Authors: Guohui Li, Muhammad Aamir Manzoor, Guoyu Wang, Shiping Huang, Xiaoyuan Ding, Muhammad Abdullah, Ming Zhang and Cheng Song
    Citation: BMC Genomic Data 2024 25:41
  9. Sunflower (Helianthus annuus) is one of the most important economic crops in oilseed production worldwide. The different cultivars exhibit variability in their resistance genes. The NAC transcription factor (TF) ...

    Authors: Yan Lu, Dongqi Liu, Xiangjiu Kong, Yang Song and Lan Jing
    Citation: BMC Genomic Data 2024 25:39
  10. Saccharum spontaneum L. is a closely related species of sugarcane and has become an important genetic component of modern sugarcane cultivars. Stem development is one of the important factors for affecting the yi...

    Authors: Xiaoqing Wu, Zetian Cui, Xinyi Li, Zehuai Yu, Pingping Lin, Li Xue, Abdullah Khan, Cailan Ou, Zuhu Deng, Muqing Zhang, Wei Yao and Fan Yu
    Citation: BMC Genomic Data 2024 25:38
  11. Sweet yellow clover (Melilotus officinalis) is a diploid plant (2n = 16) that is native to Europe. It is an excellent legume forage. It can both fix nitrogen and serve as a medicine. A genome assembly of Melilotu...

    Authors: Aoran Meng, Xinru Li, Zhiguang Li, Fuhong Miao, Lichao Ma, Shuo Li, Wenfei Sun, Jianwei Huang and Guofeng Yang
    Citation: BMC Genomic Data 2024 25:37
  12. Soil salinization is one of the vital factors threatening the world’s food security. To reveal the biological mechanism of response to salt stress in wheat, this study was conducted to resolve the transcriptio...

    Authors: Wei Wang, Sufang Huang, Zhi Wang, Pingping Cao, Meng Luo and Fengzhi Wang
    Citation: BMC Genomic Data 2024 25:36
  13. Calamus tetradactylus, a species primarily distributed in Vietnam, Laos, and southern China, is highly valued for its utilization as a small-diameter rattan material. While its physical and mechanical properties...

    Authors: Haibo Zhang, Peng Liu, Yi Zhang, Huayu Sun, Yue Wang, Zhimin Gao and Xin Liu
    Citation: BMC Genomic Data 2024 25:34
  14. Understanding flower developmental processes is a prerequisite for improving flowering ‘plants’ production. Adonis amurensis is a fascinating spring ephemeral plant that develops its flower organs underground. Ne...

    Authors: Hui Xin, Lifan Zhang, Hongtao Wang and Xingzun Zhu
    Citation: BMC Genomic Data 2024 25:33
  15. Dates contain various minerals that are essential for good health. The major RNA interference (RNAi) gene families play a vital role in plant growth and development by controlling the expression of protein-cod...

    Authors: Darun Naim, Asif Ahsan, Ahmed Imtiaj and Nurul Haque Mollah
    Citation: BMC Genomic Data 2024 25:31
  16. The suamc genus Rhus (sensu stricto) includes two subgenera, Lobadium (ca. 25 spp.) and Rhus (ca. 10 spp.). Their members, R. glabra and R. typhina (Rosanae: Sapindales: Anacardiaceae), are two economic important...

    Authors: Lan Huang, Yujie Xu, Virginia Valcárcel, Sue Lutz, Jun Wen and Zhumei Ren
    Citation: BMC Genomic Data 2024 25:30
  17. Gleditsia sinensis is a significant tree species from both ecological and economic perspectives. However, its growth is hampered by temporary droughts during the seedling stage, thereby impeding the development o...

    Authors: Fuhua Liu, Yang Zhao, Xiurong Wang, Biao Wang, Feng Xiao and Kequan He
    Citation: BMC Genomic Data 2024 25:29
  18. The endosymbiosis with Symbiodiniaceae is key to the ecological success of reef-building corals. However, climate change is threatening to destabilize this symbiosis on a global scale. Most studies looking int...

    Authors: Youfang Sun, Yi Lan, Nils Rädecker, Huaxia Sheng, Guillermo Diaz-Pulido, Pei-Yuan Qian and Hui Huang
    Citation: BMC Genomic Data 2024 25:28
  19. The black rhinoceros (Diceros bicornis) is an endangered mammal for which a captive breeding program is part of the conservation effort. Black rhinos in zoo’s often suffer from chronic infections and heamochromat...

    Authors: Ken Kraaijeveld, Koen Bossers, Nikola Petrusevski, Stef Pieterman, Linda G.R. Bruins-van Sonsbeek and Floyd Wittink
    Citation: BMC Genomic Data 2024 25:27
  20. YABBY gene family is a plant-specific transcription factor with DNA binding domain involved in various functions i.e. regulation of style, length of flowers, and polarity development of lateral organs in floweri...

    Authors: Mujahid Hussain, Muhammad Mubashar Javed, Adnan Sami, Muhammad Shafiq, Qurban Ali, Hafiz Sabah-Ud-Din Mazhar, Javaria Tabassum, Muhammad Arshad Javed, Muhammad Zeeshan Haider, Muhammad Hussain, Irfan Ali Sabir and Daoud Ali
    Citation: BMC Genomic Data 2024 25:26
  21. Soybean is an important feed and oil crop in the world due to its high protein and oil content. China has a collection of more than 43,000 soybean germplasm resources, which provides a rich genetic diversity f...

    Authors: Zhi Liu, Qing Yang, Bingqiang Liu, Chenhui Li, Xiaolei Shi, Yu Wei, Yuefeng Guan, Chunyan Yang, Mengchen Zhang and Long Yan
    Citation: BMC Genomic Data 2024 25:25
  22. Brasenia is a monotypic genus in the family of Cabombaceae. The only species, B. schreberi, is a macrophyte distributed worldwide. Because it requires good water quality, it is endangered in China and other count...

    Authors: Lin-Fang Wu, Wei-Guang Zhu, En-Ping Yu, Hong-Lin Cao and Zheng-Feng Wang
    Citation: BMC Genomic Data 2024 25:24
  23. GGC and GCC short tandem repeats (STRs) are of various evolutionary, biological, and pathological implications. However, the fundamental two-repeats (dyads) of these STRs are widely unexplored.

    Authors: M. Arabfard, N. Tajeddin, S. Alizadeh, M. Salesi, H. Bayat, H. R. Khorram Khorshid, S. Khamse, A. Delbari and M. Ohadi
    Citation: BMC Genomic Data 2024 25:21
  24. Flowering plays an important role in completing the reproductive cycle of plants and obtaining next generation of plants. In case of citrus, it may take more than a year to achieve progeny. Therefore, in order...

    Authors: Harleen Kaur, Pooja Manchanda, Gurupkar S. Sidhu and Parveen Chhuneja
    Citation: BMC Genomic Data 2024 25:20
  25. Influenza virus infections represent a major global health problem. The dynamin-like GTPase MX1 is an interferon-dependent antiviral host protein that confers resistance to influenza virus infections. Infectio...

    Authors: Silke Bergmann, Linda Brunotte and Klaus Schughart
    Citation: BMC Genomic Data 2024 25:19
  26. Vibrio cholerae is an enteric pathogen that poses a significant threat to global health. It causes severe dehydrating diarrheal disease cholera in humans. V. cholerae could be acquired either from consuming conta...

    Authors: Opeyemi U. Lawal, Noah Bryan, Mitra Soni, Yanhong Chen, Melinda Precious, Valeria R. Parreira and Lawrence Goodridge
    Citation: BMC Genomic Data 2024 25:18
  27. Beef marbling is considered a desirable trait in the meat industry. Therefore, understanding the genetic factors that cause marbling is important. Previously, we performed a genome-wide association study to ex...

    Authors: Shinji Sasazaki, Hina Kondo, Yurika Moriishi, Fuki Kawaguchi, Kenji Oyama and Hideyuki Mannen
    Citation: BMC Genomic Data 2024 25:17
  28. Numerous species within the genus Caragana have high ecological and medicinal value. However, species identification based on morphological characteristics is quite complicated in the genus. To address this issue...

    Authors: LiE Liu, Hongyan Li, Jiaxin Li, Xinjuan Li, Na Hu, Honglun Wang and Wu Zhou
    Citation: BMC Genomic Data 2024 25:16
  29. Recent advancements in genome-based taxonomic classification propose the reclassification of certain Actinomyces species into new genera, including Schaalia. Schaalia odontolytica, the type species within this ge...

    Authors: Eun-Young Jang, Jeewan Chun, Kyu Hwan Kwack, Ji-Hoi Moon and Jae-Hyung Lee
    Citation: BMC Genomic Data 2024 25:15
  30. Sorghum (Sorghum bicolor (L.) Moench) is the fifth most important grain produced in the world. Interest for cultivating sorghum is increasing all over the world in the context of climate change, due to its low in...

    Authors: Camille Costes, Sergi Navarro Sanz, Caroline Calatayud, Alexandre Soriano, Hamza Mameri, Nancy Terrier and Mathilde Francin-Allami
    Citation: BMC Genomic Data 2024 25:14
  31. Listeriosis caused by Listeria monocytogenes often poses a significant threat to vulnerable populations. Dairy products have been implicated in outbreaks of listeriosis worldwide. In Ethiopia, studies have identi...

    Authors: Xiaoyuan Wei, Anwar Hassen, Karen McWilliams, Karen Pietrzen, Taejung Chung, Marysabel Méndez Acevedo, Tyler Chandross-Cohen, Edward G. Dudley, Jessie Vipham, Hassen Mamo, Tesfaye Sisay Tessema, Ashagrie Zewdu and Jasna Kovac
    Citation: BMC Genomic Data 2024 25:12
  32. Krascheninnikovia ceratoides, a perennial halophytic semi-shrub belonging to the genus Krascheninnikovia (Amarathaceae), possesses noteworthy ecological, nutritional, and economic relevance. This species is prim...

    Authors: Yuping Liu, Changyuan Zheng, Xu Su, Jinyuan Chen, Xiaoli Li, Chenglin Sun and Mir Muhammad Nizamani
    Citation: BMC Genomic Data 2024 25:10
  33. The cold stress susceptibility of tomato (Solanum lycopersicum) curtails its cultivation, with significant impact in temperate regions and on cropping seasons. To unravel genomic regions responsible for cold stre...

    Authors: Labiba Riyaz Shah, Nazeer Ahmed, Khursheed Hussain, Sheikh Mansoor, Tamana Khan, Imran Khan, Sumati Narayan, Baseerat Afroza, Imtiyaz Murtaza, Asif Bashir Shikari, Basharat Bhat and Khalid Z. Masoodi
    Citation: BMC Genomic Data 2024 25:9
  34. Recent advancements in next-generation sequencing (NGS) technology have ushered in significant improvements in sequencing speed and data throughput, thereby enabling the simultaneous analysis of a greater numb...

    Authors: A.K. Larin, K.M. Klimina, V.A. Veselovsky, E.I. Olekhnovich, M.D. Morozov, D.I. Boldyreva, R.A. Yunes, A.I. Manolov, D.E. Fedorov, A.V. Pavlenko, Y.S. Galeeva, E.V. Starikova and E.N. Ilina
    Citation: BMC Genomic Data 2024 25:8
  35. Chickpea (Cicer arietinum L.) production is affected by many biotic factors, among them Fusarium wilt caused by Fusarium oxysporum f. sp. ciceri and Botrytis gray mold caused by Botrytis cinerea led to severe los...

    Authors: Gurreddi Bhargavi, Meenakshi Arya, Prashant Prakash Jambhulkar, Anshuman Singh, Ajaya Kumar Rout, Bijay Kumar Behera, Sushil Kumar Chaturvedi and Ashok Kumar Singh
    Citation: BMC Genomic Data 2024 25:7
  36. Hybridization is a useful strategy to produce offspring with more desirable phenotypic characteristics than those of parents. The hybrid grouper derived from the cross of Cromileptes altivelis (♀, 2n = 48) with E...

    Authors: Liu Cao, Pan Chen, Xingrong Hou, Jun Ma, Ning Yang, Yan Lu and Hai Huang
    Citation: BMC Genomic Data 2024 25:5
  37. The data presented in this study were collected with the aim of obtaining the complete genomes of specific strains of Bacillus bacteria, namely, Bacillus licheniformis T5. This strain was chosen based on its enzy...

    Authors: Arman Mussakhmetov, Assel Kiribayeva, Asset Daniyarov, Aitbay Bulashev, Ulykbek Kairov and Bekbolat Khassenov
    Citation: BMC Genomic Data 2024 25:3
  38. Escallonia (Escalloniaceae) belongs to the Escalloniales, a diverse clade of flowering plants with unclear placement in the tree of life. Escallonia species show impressive morphological and ecological diversity ...

    Authors: Andre S. Chanderbali, Christopher Dervinis, Ioana G. Anghel, Douglas E. Soltis, Pamela S. Soltis and Felipe Zapata
    Citation: BMC Genomic Data 2024 25:1
  39. Genomewide prediction estimates the genomic breeding values of selection candidates which can be utilized for population improvement and cultivar development. Ridge regression and deep learning-based selection...

    Authors: Dennis N. Lozada, Karansher Singh Sandhu and Madhav Bhatta
    Citation: BMC Genomic Data 2023 24:80

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