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  1. The aim of our study was to use the differentially expressed mRNAs (DEmRNAs) and differentially expressed miRNAs (DEmiRNAs) to illustrate the underlying mechanism of hypoxia in liver cancer.

    Authors: Xin Zhao, Wenpeng Liu, Baowang Liu, Qiang Zeng, Ziqiang Cui, Yang Wang, Jinglin Cao, Qingjun Gao, Caiyan Zhao and Jian Dou
    Citation: BMC Genomic Data 2022 23:38
  2. Yield-related traits including thousand grain weight (TGW), grain number per spike (GNS), grain width (GW), grain length (GL), plant height (PH), spike length (SL), and spikelet number per spike (SNS) are grea...

    Authors: Tao Li, Qiao Li, Jinhui Wang, Zhao Yang, Yanyan Tang, Yan Su, Juanyu Zhang, Xvebing Qiu, Xi Pu, Zhifen Pan, Haili Zhang, Junjun Liang, Zehou Liu, Jun Li, Wuyun Yan, Maoqun Yu…
    Citation: BMC Genomic Data 2022 23:37
  3. Adipose tissues (ATs), including visceral ATs (VATs) and subcutaneous ATs (SATs), are crucial for maintaining energy and metabolic homeostasis. SATs have been found to be closely related to obesity and obesity...

    Authors: Huiyu Wang, Xiaoyi Wang, Mingli Li, Shuyan Wang, Qiang Chen and Shaoxiong Lu
    Citation: BMC Genomic Data 2022 23:35
  4. Authors: Kolja N. Eckermann, Stefan Dippel, Eli M. Carrami, Hassan M. Ahmed, Ingrid M. Curril and Ernst A. Wimmer
    Citation: BMC Genomic Data 2022 23:32

    The original article was published in BMC Genomic Data 2014 15:S17

  5. As part of a research aiming at the isolation of bacteria secreting growth inhibiting compounds, cultures of Francisella tularensis were implanted in environmental samples and monitored for inhibition zones on ag...

    Authors: Yehoudit Guedj-Dana, Inbar Cohen-Gihon, Ofir Israeli, Ohad Shifman, Tamar Aminov, Shahar Rotem, Raphael Ber and Anat Zvi
    Citation: BMC Genomic Data 2022 23:31
  6. B-cell precursor acute lymphoblastic leukemia (BCP-ALL) is a genetically heterogenous malignancy with poor prognosis in relapsed adult patients. The genetic basis for relapse in aneuploid subtypes such as near...

    Authors: Lorenz Bartsch, Michael P. Schroeder, Sonja Hänzelmann, Lorenz Bastian, Juan Lázaro-Navarro, Cornelia Schlee, Jutta Ortiz Tanchez, Veronika Schulze, Konstandina Isaakidis, Michael A. Rieger, Nicola Gökbuget, Cornelia Eckert, Hubert Serve, Martin Horstmann, Martin Schrappe, Monika Brüggemann…
    Citation: BMC Genomic Data 2022 23:30
  7. Amphioxus is a model organism for vertebrate evolutionary research. The significant contrast between morphological phenotypic similarity and high-level genetic polymorphism among amphioxus populations has arou...

    Authors: Yunchi Zhu, Na Lu, J.-Y. Chen, Chunpeng He, Zhen Huang and Zuhong Lu
    Citation: BMC Genomic Data 2022 23:26
  8. The coronavirus nonstructural protein 5 (Nsp5) is a cysteine protease required for processing the viral polyprotein and is therefore crucial for viral replication. Nsp5 from several coronaviruses have also bee...

    Authors: Benjamin M. Scott, Vincent Lacasse, Ditte G. Blom, Peter D. Tonner and Nikolaj S. Blom
    Citation: BMC Genomic Data 2022 23:25
  9. Leukemia is the most common type of cancer in pediatrics. Genomic mutations contribute towards the molecular mechanism of disease progression and also helps in diagnosis and prognosis. This is the first scient...

    Authors: Andrew Vanlallawma, Doris Lallawmzuali, Jeremy L. Pautu, Vinod Scaria, Sridhar Sivasubbu and Nachimuthu Senthil Kumar
    Citation: BMC Genomic Data 2022 23:23
  10. American shad (Alosa sapidissima) is an important migratory fish under Alosinae and has long been valued for its economic, nutritional and cultural attributes. Overfishing and barriers across the passage made it ...

    Authors: Kishor Kumar Sarker, Liang Lu, Junman Huang, Tao Zhou, Li Wang, Yun Hu, Lei Jiang, Habibon Naher, Mohammad Abdul Baki, Anirban Sarker and Chenhong Li
    Citation: BMC Genomic Data 2022 23:22
  11. Pepper is a major crop species of the Solanaceae family, largely appreciated for its high nutritional and healthy contribution to human diets. In the Mediterranean basin, the favorable pedoclimatic conditions ...

    Authors: Salvatore Esposito, Riccardo Aiese Cigliano, Teodoro Cardi and Pasquale Tripodi
    Citation: BMC Genomic Data 2022 23:21
  12. Melanoma Antigen Genes (MAGEs) are a family of genes that have piqued the interest of scientists for their unique expression pattern. The MAGE genes can be classified into type I MAGEs that expressed in testis...

    Authors: Bosenu Abera and Hunduma Dinka
    Citation: BMC Genomic Data 2022 23:19
  13. Selection for feed efficiency is one of the best ways to decrease poultry production costs and environmental impacts. While literature on its genetic determinism is abundant, it is limited to one or a few peri...

    Authors: Quentin Berger, Elodie Guettier, Jérémy Bernard, Patrice Ganier, Marine Chahnamian, Elisabeth Le Bihan-Duval and Sandrine Mignon-Grasteau
    Citation: BMC Genomic Data 2022 23:18
  14. Differentiation of Immortalized Human Bone Marrow Mesenchymal Stromal Cells - hTERT (iMSC3) into adipocytes is in vitro model of obesity. In our earlier study, rosiglitazone enhanced adipogenesis particularly ...

    Authors: Moza Mohamed Al-Ali, Amir Ali Khan, Abeer Maher Fayyad, Sallam Hasan Abdallah and Muhammad Nasir Khan Khattak
    Citation: BMC Genomic Data 2022 23:17
  15. Mitochondrial participation in tumorigenesis and metastasis has been studied for many years, but several aspects of this mechanism remain unclear, such as the association of mitochondrial DNA (mtDNA) with diff...

    Authors: Giovanna C. Cavalcante, Ândrea Ribeiro-dos-Santos and Gilderlanio S. de Araújo
    Citation: BMC Genomic Data 2022 23:16
  16. Administration of Magnoliae Cortex (MC) could induce remission of cisplatin-induced sarcopenia in mice, however, whether it is effective on sarcopenia patients and the underlying mechanisms remain unclear.

    Authors: Xingqi Zhao, Feifei Yuan, Haoyang Wan, Hanjun Qin, Nan Jiang and Bin Yu
    Citation: BMC Genomic Data 2022 23:15
  17. Two individuals with a first-degree relationship share about 50 percent of their alleles. Parent–offspring relationships cannot be homozygous for alternative alleles (genetic exclusion).

    Authors: L. Gomez-Raya, E. Gómez Izquierdo, E. de Mercado de la Peña, F. Garcia-Ruiz and W.M. Rauw
    Citation: BMC Genomic Data 2022 23:14
  18. Numerous genome-wide association studies (GWAS) conducted to date revealed genetic variants associated with various diseases, including breast and prostate cancers. Despite the availability of these large-scal...

    Authors: Noha Osman, Abd-El-Monsif Shawky and Michal Brylinski
    Citation: BMC Genomic Data 2022 23:13
  19. Multi-walled carbon nanotube (MWCNT) is one of the most momentous carbonaceous nanoparticles which is widely used for various applications such as electronics, vehicles, and therapeutics. However, their possib...

    Authors: Shameran Jamal Salih and Mohadeseh Zarei Ghobadi
    Citation: BMC Genomic Data 2022 23:12
  20. Emerging wheat stem rust races have become a major threat to global wheat production. Finding additional loci responsible for resistance to these races and incorporating them into currently cultivated varietie...

    Authors: Elias Shewabez, Endashaw Bekele, Admas Alemu, Laura Mugnai and Wuletaw Tadesse
    Citation: BMC Genomic Data 2022 23:11
  21. Endometrial carcinoma (EC) is one of the most common gynecological malignant tumors. In this study, we constructed gene co-expression networks to identify key modules and hub genes involved in the pathogenesis...

    Authors: Chong Feng, Lei Cui, Zhen Jin, Lei Sun, Xiaoyan Wang, Xinshu Chi, Qian Sun and Siyu Lian
    Citation: BMC Genomic Data 2022 23:10
  22. CesA and Csl gene families, which belong to the cellulose synthase gene superfamily, plays an important role in the biosynthesis of the plant cell wall. Although researchers have investigated this gene superfami...

    Authors: Xiaoqing Liu, Hongmei Zhang, Wei Zhang, Wenjing Xu, Songsong Li, Xin Chen and Huatao Chen
    Citation: BMC Genomic Data 2022 23:9
  23. Several recent studies have confirmed epigenetic regulation of the immune response. However, the potential role of RNA N6-methyladenosine (m6A) modifications in cervical cancer and tumour microenvironment (TME) c...

    Authors: He Zhang, Weimin Kong, Xiaoling Zhao, Chao Han, Tingting Liu, Jing Li and Dan Song
    Citation: BMC Genomic Data 2022 23:8
  24. Belonging to the protein arginine methyltransferase (PRMT) family, the enzyme encoded by coactivator associated arginine methyltransferase 1 (CARM1) catalyzes the methylation of protein arginine residues, espe...

    Authors: Yingqi Qiu, Hao Wang, Peiyun Liao, Binyan Xu, Rong Hu, Yulu Yang and Yuhua Li
    Citation: BMC Genomic Data 2022 23:7
  25. Elucidating the dynamic topological changes across different stages of breast cancer, called stage re-wiring, could lead to identifying key latent regulatory signatures involved in cancer progression. Such dyn...

    Authors: Samane Khoshbakht, Majid Mokhtari, Sayyed Sajjad Moravveji, Sadegh Azimzadeh Jamalkandi and Ali Masoudi-Nejad
    Citation: BMC Genomic Data 2022 23:6
  26. Pancreatic cancer (PC) is a highly lethal disease and an increasing cause of cancer-associated mortality worldwide. Interferon regulatory factors (IRFs) play vital roles in immune response and tumor cellular b...

    Authors: Ke Zhang, Pan-Ling Xu, Yu-Jie Li, Shu Dong, Hui-Feng Gao, Lian-Yu Chen, Hao Chen and Zhen Chen
    Citation: BMC Genomic Data 2022 23:5
  27. The present study aimed at characterizing the Djallonké Sheep (DS), the only local sheep breed raised in Guinea-Bissau. A total of 200 animals were sampled from four regions (Bafatá, Gabú, Oio and Cacheu) and ...

    Authors: Guiguigbaza-Kossigan Dayo, Isidore Houaga, Martin Bienvenu Somda, Awa Linguelegue, Mamadou Ira, Maurice Konkobo, Bacar Djassi, Joao Gomes, Mamadou Sangare, Bernardo Cassama and Chia Valentine Yapi-Gnaore
    Citation: BMC Genomic Data 2022 23:3
  28. Metabolism including anabolism and catabolism is a prerequisite phenomenon for all living organisms. Anabolism refers to the synthesis of the entire compound needed by a species. Catabolism refers to the break...

    Authors: Prasansah Shrestha, Min-Su Kim, Ermal Elbasani, Jeong-Dong Kim and Tae-Jin Oh
    Citation: BMC Genomic Data 2022 23:4
  29. Testosterone signaling mediates various diseases, such as androgenetic alopecia and prostate cancer. Testosterone signaling is mediated by the androgen receptor (AR). In this study, we fortuitously found that ...

    Authors: Kai Furuya, So Fujibayashi, Tao Wu, Kouhei Takahashi, Shin Takase, Ai Orimoto, Eriko Sugano, Hiroshi Tomita, Sayo Kashiwagi, Tohru Kiyono, Tsuyoshi Ishii and Tomokazu Fukuda
    Citation: BMC Genomic Data 2022 23:2
  30. The identification of markers and genes for growth traits may not only benefit for marker assist selection /genomic selection but also provide important information for understanding the genetic foundation of ...

    Authors: Dachang Dou, Linyong Shen, Jiamei Zhou, Zhiping Cao, Peng Luan, Yumao Li, Fan Xiao, Huaishun Guo, Hui Li and Hui Zhang
    Citation: BMC Genomic Data 2022 23:1
  31. Bone marrow (BM) and umbilical cord (UC) are the main sources of mesenchymal stem cells (MSCs). These two MSCs display significant differences in many biological characteristics, yet the underlying regulation ...

    Authors: Zheng Feng, Yalan Yang, Zhiguo Liu, Weimin Zhao, Lei Huang, Tianwen Wu and Yulian Mu
    Citation: BMC Genomic Data 2021 22:56
  32. Since genes involved in the same biological modules usually present correlated expression profiles, lots of computational methods have been proposed to identify gene functional modules based on the expression ...

    Authors: Fangfang Zhu, Jiang Li, Juan Liu and Wenwen Min
    Citation: BMC Genomic Data 2021 22(Suppl 1):54

    This article is part of a Supplement: Volume 22 Supplement 1

  33. Cupressaceae is the second largest family of coniferous trees (Coniferopsida) with important economic and ecological values. However, like other conifers, the members of Cupressaceae have extremely large genom...

    Authors: Yufei Wang, Siyu Xie, Jialiang Li, Jieshi Tang, Tsam Ju and Kangshan Mao
    Citation: BMC Genomic Data 2021 22:55
  34. Wild boar (Sus scrofa) is a widely distributed ungulate whose success can be attributed to a variety of ecological features. The genetic variation and population structure of Lithuania’s wild boar population have...

    Authors: Loreta Griciuvienė, Žygimantas Janeliūnas, Vaclovas Jurgelevičius and Algimantas Paulauskas
    Citation: BMC Genomic Data 2021 22:53
  35. Mitochondrial DNA (mtDNA) codes for products necessary for electron transport and mitochondrial gene translation. mtDNA mutations can lead to human disease and influence organismal fitness. The PolG mutator mo...

    Authors: Kendra D. Maclaine, Kevin A. Stebbings, Daniel A. Llano and Justin C. Havird
    Citation: BMC Genomic Data 2021 22:52
  36. The variation of drug responses and target does among individuals is mostly determined by genes. With the development of pharmacogenetics and pharmacogenomics, the differences in drug response between differen...

    Authors: Dandan Li, Linna Peng, Shishi Xing, Chunjuan He and Tianbo Jin
    Citation: BMC Genomic Data 2021 22:51
  37. There is an urgent need to understand the key events driving pathogenesis of severe COVID-19 disease, so that precise treatment can be instituted. In this respect NETosis is gaining increased attention in the ...

    Authors: Samanwoy Mukhopadhyay, Subrata Sinha and Saroj Kant Mohapatra
    Citation: BMC Genomic Data 2021 22:49
  38. This study aims to characterize SARS-CoV-2 mutations which are primarily prevalent in the Cypriot population. Moreover, using computational approaches, we assess whether these mutations are associated with cha...

    Authors: Anastasis Oulas, Jan Richter, Maria Zanti, Marios Tomazou, Kyriaki Michailidou, Kyproula Christodoulou, Christina Christodoulou and George M. Spyrou
    Citation: BMC Genomic Data 2021 22:48
  39. Our preliminary work confirmed that, SLC22A7 (solute carrier family 22 member 7), NGFR (nerve growth factor receptor), ARNTL (aryl hydrocarbon receptor nuclear translocator like) and PPP2R2B (protein phosphatase ...

    Authors: Ruike Jia, Yihan Fu, Lingna Xu, Houcheng Li, Yanhua Li, Lin Liu, Zhu Ma, Dongxiao Sun and Bo Han
    Citation: BMC Genomic Data 2021 22:47
  40. With high-efficient water-use and drought tolerance, broomcorn millet has emerged as a candidate for food security. To promote its research process for molecular breeding and functional research, a comprehensi...

    Authors: Wei Xu, Mengjie Liang, Xue Yang, Hao Wang and Meizhong Luo
    Citation: BMC Genomic Data 2021 22:46

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