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  1. GGC and GCC short tandem repeats (STRs) are of various evolutionary, biological, and pathological implications. However, the fundamental two-repeats (dyads) of these STRs are widely unexplored.

    Authors: M. Arabfard, N. Tajeddin, S. Alizadeh, M. Salesi, H. Bayat, H. R. Khorram Khorshid, S. Khamse, A. Delbari and M. Ohadi
    Citation: BMC Genomic Data 2024 25:21
  2. Flowering plays an important role in completing the reproductive cycle of plants and obtaining next generation of plants. In case of citrus, it may take more than a year to achieve progeny. Therefore, in order...

    Authors: Harleen Kaur, Pooja Manchanda, Gurupkar S. Sidhu and Parveen Chhuneja
    Citation: BMC Genomic Data 2024 25:20
  3. Influenza virus infections represent a major global health problem. The dynamin-like GTPase MX1 is an interferon-dependent antiviral host protein that confers resistance to influenza virus infections. Infectio...

    Authors: Silke Bergmann, Linda Brunotte and Klaus Schughart
    Citation: BMC Genomic Data 2024 25:19
  4. Vibrio cholerae is an enteric pathogen that poses a significant threat to global health. It causes severe dehydrating diarrheal disease cholera in humans. V. cholerae could be acquired either from consuming conta...

    Authors: Opeyemi U. Lawal, Noah Bryan, Mitra Soni, Yanhong Chen, Melinda Precious, Valeria R. Parreira and Lawrence Goodridge
    Citation: BMC Genomic Data 2024 25:18
  5. Beef marbling is considered a desirable trait in the meat industry. Therefore, understanding the genetic factors that cause marbling is important. Previously, we performed a genome-wide association study to ex...

    Authors: Shinji Sasazaki, Hina Kondo, Yurika Moriishi, Fuki Kawaguchi, Kenji Oyama and Hideyuki Mannen
    Citation: BMC Genomic Data 2024 25:17
  6. Numerous species within the genus Caragana have high ecological and medicinal value. However, species identification based on morphological characteristics is quite complicated in the genus. To address this issue...

    Authors: LiE Liu, Hongyan Li, Jiaxin Li, Xinjuan Li, Na Hu, Honglun Wang and Wu Zhou
    Citation: BMC Genomic Data 2024 25:16
  7. Recent advancements in genome-based taxonomic classification propose the reclassification of certain Actinomyces species into new genera, including Schaalia. Schaalia odontolytica, the type species within this ge...

    Authors: Eun-Young Jang, Jeewan Chun, Kyu Hwan Kwack, Ji-Hoi Moon and Jae-Hyung Lee
    Citation: BMC Genomic Data 2024 25:15
  8. Sorghum (Sorghum bicolor (L.) Moench) is the fifth most important grain produced in the world. Interest for cultivating sorghum is increasing all over the world in the context of climate change, due to its low in...

    Authors: Camille Costes, Sergi Navarro Sanz, Caroline Calatayud, Alexandre Soriano, Hamza Mameri, Nancy Terrier and Mathilde Francin-Allami
    Citation: BMC Genomic Data 2024 25:14
  9. Listeriosis caused by Listeria monocytogenes often poses a significant threat to vulnerable populations. Dairy products have been implicated in outbreaks of listeriosis worldwide. In Ethiopia, studies have identi...

    Authors: Xiaoyuan Wei, Anwar Hassen, Karen McWilliams, Karen Pietrzen, Taejung Chung, Marysabel Méndez Acevedo, Tyler Chandross-Cohen, Edward G. Dudley, Jessie Vipham, Hassen Mamo, Tesfaye Sisay Tessema, Ashagrie Zewdu and Jasna Kovac
    Citation: BMC Genomic Data 2024 25:12
  10. Krascheninnikovia ceratoides, a perennial halophytic semi-shrub belonging to the genus Krascheninnikovia (Amarathaceae), possesses noteworthy ecological, nutritional, and economic relevance. This species is prim...

    Authors: Yuping Liu, Changyuan Zheng, Xu Su, Jinyuan Chen, Xiaoli Li, Chenglin Sun and Mir Muhammad Nizamani
    Citation: BMC Genomic Data 2024 25:10
  11. The cold stress susceptibility of tomato (Solanum lycopersicum) curtails its cultivation, with significant impact in temperate regions and on cropping seasons. To unravel genomic regions responsible for cold stre...

    Authors: Labiba Riyaz Shah, Nazeer Ahmed, Khursheed Hussain, Sheikh Mansoor, Tamana Khan, Imran Khan, Sumati Narayan, Baseerat Afroza, Imtiyaz Murtaza, Asif Bashir Shikari, Basharat Bhat and Khalid Z. Masoodi
    Citation: BMC Genomic Data 2024 25:9
  12. Recent advancements in next-generation sequencing (NGS) technology have ushered in significant improvements in sequencing speed and data throughput, thereby enabling the simultaneous analysis of a greater numb...

    Authors: A.K. Larin, K.M. Klimina, V.A. Veselovsky, E.I. Olekhnovich, M.D. Morozov, D.I. Boldyreva, R.A. Yunes, A.I. Manolov, D.E. Fedorov, A.V. Pavlenko, Y.S. Galeeva, E.V. Starikova and E.N. Ilina
    Citation: BMC Genomic Data 2024 25:8
  13. Chickpea (Cicer arietinum L.) production is affected by many biotic factors, among them Fusarium wilt caused by Fusarium oxysporum f. sp. ciceri and Botrytis gray mold caused by Botrytis cinerea led to severe los...

    Authors: Gurreddi Bhargavi, Meenakshi Arya, Prashant Prakash Jambhulkar, Anshuman Singh, Ajaya Kumar Rout, Bijay Kumar Behera, Sushil Kumar Chaturvedi and Ashok Kumar Singh
    Citation: BMC Genomic Data 2024 25:7
  14. Hybridization is a useful strategy to produce offspring with more desirable phenotypic characteristics than those of parents. The hybrid grouper derived from the cross of Cromileptes altivelis (♀, 2n = 48) with E...

    Authors: Liu Cao, Pan Chen, Xingrong Hou, Jun Ma, Ning Yang, Yan Lu and Hai Huang
    Citation: BMC Genomic Data 2024 25:5
  15. The data presented in this study were collected with the aim of obtaining the complete genomes of specific strains of Bacillus bacteria, namely, Bacillus licheniformis T5. This strain was chosen based on its enzy...

    Authors: Arman Mussakhmetov, Assel Kiribayeva, Asset Daniyarov, Aitbay Bulashev, Ulykbek Kairov and Bekbolat Khassenov
    Citation: BMC Genomic Data 2024 25:3
  16. Escallonia (Escalloniaceae) belongs to the Escalloniales, a diverse clade of flowering plants with unclear placement in the tree of life. Escallonia species show impressive morphological and ecological diversity ...

    Authors: Andre S. Chanderbali, Christopher Dervinis, Ioana G. Anghel, Douglas E. Soltis, Pamela S. Soltis and Felipe Zapata
    Citation: BMC Genomic Data 2024 25:1
  17. Genomewide prediction estimates the genomic breeding values of selection candidates which can be utilized for population improvement and cultivar development. Ridge regression and deep learning-based selection...

    Authors: Dennis N. Lozada, Karansher Singh Sandhu and Madhav Bhatta
    Citation: BMC Genomic Data 2023 24:80
  18. Castanopsis is the third largest genus in the Fagaceae family and is essentially tropical or subtropical in origin. The species in this genus are mainly canopy-dominant trees, and the key components of evergreen ...

    Authors: Pan Chen, Ju-Yu Lian, Bin Wu, Hong-Lin Cao, Zhi-Hong Li and Zheng-Feng Wang
    Citation: BMC Genomic Data 2023 24:78
  19. Goat products have played a crucial role in meeting the dietary demands of people since the Neolithic era, giving rise to a multitude of goat breeds globally with varying characteristics and meat qualities. Th...

    Authors: Yuwei Ren, Xing Chen, Xinli Zheng, Feng Wang, Ruiping Sun, Limin Wei, Yan Zhang, Hailong Liu, Yanning Lin, Lingling Hong, Xiaoxian Huang and Zhe Chao
    Citation: BMC Genomic Data 2023 24:77
  20. Non-additive genetic effects are often ignored in livestock genetic evaluations. However, fitting them in the models could improve the accuracy of genomic breeding values. Furthermore, non-additive genetic eff...

    Authors: Letícia Fernanda de Oliveira, Luiz F. Brito, Daniele Botelho Diniz Marques, Delvan Alves da Silva, Paulo Sávio Lopes, Cassiane Gomes dos Santos, Jay S. Johnson and Renata Veroneze
    Citation: BMC Genomic Data 2023 24:76
  21. Lavandula angustifolia (English lavender) is commercially important not only as an ornamental species but also as a major source of fragrances. To better understand the genomic basis of chemical diversity in lave...

    Authors: John P. Hamilton, Brieanne Vaillancourt, Joshua C. Wood, Haiyan Wang, Jiming Jiang, Douglas E. Soltis, C. Robin Buell and Pamela S. Soltis
    Citation: BMC Genomic Data 2023 24:75
  22. Coat color, as a distinct phenotypic characteristic of pigs, is often subject to preference and selection, such as in the breeding process of new breed. Shanxia long black pig was derived from an intercross be...

    Authors: Hao Zheng, San-ya Xiong, Shi-jun Xiao, Ze-kai Zhang, Jin-min Tu, Deng-shuai Cui, Nai-biao Yu, Zhi-yong Huang, Long-yun Li and Yuan-mei Guo
    Citation: BMC Genomic Data 2023 24:74
  23. Erythrophleum is a genus in the Fabaceae family. The genus contains only about 10 species, and it is best known for its hardwood and medical properties worldwide. Erythrophleum fordii Oliv. is the only species of...

    Authors: Chang-Yu Wen, Ju-Yu Lian, Wei-Xiong Peng, Zheng-Feng Wang, Zhi-Gang Yang and Hong-Lin Cao
    Citation: BMC Genomic Data 2023 24:73
  24. Our previous research identified the Kruppel like factor 6 (KLF6) gene as a prospective candidate for milk production traits in dairy cattle. The expression of KLF6 in the livers of Holstein cows during the peak ...

    Authors: Yanan Liu, Bo Han, Weijie Zheng, Peng Peng, Chendong Yang, Guie Jiang, Yabin Ma, Jianming Li, Junqing Ni and Dongxiao Sun
    Citation: BMC Genomic Data 2023 24:72
  25. Complex disorders are caused by a combination of genetic, environmental and lifestyle factors, and their prevalence can vary greatly across different populations. The extent to which genetic risk, as identifie...

    Authors: Pritesh R. Jain, Myson Burch, Melanie Martinez, Pablo Mir, Jakub P. Fichna, Cezary Zekanowski, Renata Rizzo, Zeynep Tümer, Csaba Barta, Evangelia Yannaki, John Stamatoyannopoulos, Petros Drineas and Peristera Paschou
    Citation: BMC Genomic Data 2023 24:70
  26. Molecular cues linked to heartwood formation open new (complementary) perspectives to genetic breeding programs of Douglas-fir, a tree species largely cultivated in Europe for the natural durability and civil ...

    Authors: Didier Delourme, Laure Brémaud, Idelette Plazanet, Patrick Pélissier, Philippe Label, Nathalie Boizot, Christian Breton, Stéphanie Durand and Guy Costa
    Citation: BMC Genomic Data 2023 24:69
  27. Viruses employ diverse strategies to interfere with host defense mechanisms, including the production of proteins that mimic or resemble host proteins. This study aimed to analyze the similarities between SARS...

    Authors: Behnia Akbari, Ehsan Ahmadi, Mohammad Reza Zabihi, Mina Roshan Zamir, Mina Sadeghi Shaker and Farshid Noorbakhsh
    Citation: BMC Genomic Data 2023 24:68
  28. In 2022, a global outbreak of monkeypox occurred with a significant shift in its epidemiological characteristics. The monkeypox virus (MPXV) belongs to the B.1 lineage, and its genomic variations that were lin...

    Authors: Jie Zhu, Jian Yu, Hao Qin, Xinlei Chen, Chuanchang Wu, Xiaodan Hong, Yafei Zhang and Zhenhua Zhang
    Citation: BMC Genomic Data 2023 24:67
  29. High-Affinity Potassium ions represent one of the most important and large group of potassium transporters. Although HAK genes have been studied in a variety of plant species, yet, remain unexplored in common bea...

    Authors: Afrasyab Khan, Zamarud Shah, Sajid Ali, Nisar Ahmad, Maaz Iqbal, Arif Ullah and Firdous Ayub
    Citation: BMC Genomic Data 2023 24:66
  30. Corynebacterium diphtheriae complex was formed by the species C. diphtheriae, Corynebacterium ulcerans and Corynebacterium pseudotuberculosis in the recent past. In addition to C. diphtheriae, C. ulcerans and C. ...

    Authors: Juliana Nunes Ramos, Max Roberto Batista Araújo, Paulo Victor Pereira Baio, Lincoln Oliveira Sant’Anna, João Flávio Carneiro Veras, Érica Miranda Damásio Vieira, Mireille Ângela Bernardes Sousa, Carlos Henrique Camargo, Cláudio Tavares Sacchi, Karoline Rodrigues Campos, Marlon Benedito Nascimento Santos, Sérgio Bokermann, Luige Biciati Alvim, Louisy Sanches dos Santos, Ana Luiza de Mattos-Guaraldi and Verônica Viana Vieira
    Citation: BMC Genomic Data 2023 24:65
  31. Candidatus Liberibacter asiaticus” (CLas) is an un-culturable α-proteobacterium that caused citrus Huanglongbing (HLB), a destructive disease threatening citrus production worldwide. In China, the presence of HL...

    Authors: Yongqin Zheng, Yun Li, Pengbin Xu, Chaoji Liu, Jianchi Chen, Xiaoling Deng and Zheng Zheng
    Citation: BMC Genomic Data 2023 24:63
  32. As an important food and cash crop, identification of DNA molecular markers is of great significance for molecular marker-assisted breeding of Sorghum (Sorghum bicolor (L.) moench). Although some sorghum-related ...

    Authors: Yanlin An, Xiaobo Xia, Huayan Zheng, Shirui Yu, Tingting Jing and Feng Zhang
    Citation: BMC Genomic Data 2023 24:62
  33. Triple-negative breast cancer (TNBC) is a highly aggressive breast cancer subtype with limited treatment options. Unlike other breast cancer subtypes, the scarcity of specific therapies and greater frequencies...

    Authors: Pere Llinàs-Arias, Miquel Ensenyat-Méndez, Javier I. J. Orozco, Sandra Íñiguez-Muñoz, Betsy Valdez, Chuan Wang, Anja Mezger, Eunkyoung Choi, Yan Zhou Tran, Liqun Yao, Franziska Bonath, Remi-André Olsen, Mattias Ormestad, Manel Esteller, Mathieu Lupien and Diego M. Marzese
    Citation: BMC Genomic Data 2023 24:61
  34. Canine anterior cruciate ligament (ACL) rupture is a common complex disease. Prevalence of ACL rupture is breed dependent. In an epidemiological study, yellow coat color was associated with increased risk of A...

    Authors: BT Lee, LA Baker, M Momen, H Terhaar, EE Binversie, SJ Sample and Peter Muir
    Citation: BMC Genomic Data 2023 24:60
  35. The cytochrome P450 (CYP) superfamily is the largest enzyme metabolism family in plants identified to date, and it is involved in many biological processes, including secondary metabolite biosynthesis, hormone me...

    Authors: Wei Zhang, Hongxiang Li, Qionghou Li, Zewen Wang, Weiwei Zeng, Hao Yin, Kaijie Qi, Ying Zou, Jian Hu, Baisha Huang, Peng Gu, Xin Qiao and Shaoling Zhang
    Citation: BMC Genomic Data 2023 24:58
  36. The establishment of heterotic groups of inbred lines is crucial for hybrid maize breeding programs. Currently, there is no information on the heterotic patterns of the Provitamin A (PVA) inbred lines develope...

    Authors: Abdoul-Raouf Sayadi Maazou, Melaku Gedil, Victor O. Adetimirin, Nnanna Unachukwu, Wende Mengesha, Silvestro Meseka and Abebe Menkir
    Citation: BMC Genomic Data 2023 24:57
  37. Recently accumulated evidence indicates a potential association between COVID-19 and elevated susceptibility to cancer, including male genital cancer. However, the causal nature of this relationship remains un...

    Authors: Dejie Wang, Yingjuan Ma, Lin Yan, Wei Gan, Yugang Han, Jiang-Shan Tan and Wenhua Zhao
    Citation: BMC Genomic Data 2023 24:56
  38. The jasmonate ZIM domain (JAZ) protein is a key repressor of the jasmonate signal transduction pathway, which plays an important role in plant growth and development and defense responses. In this study, based...

    Authors: Gaixia Yang, Shijie Wang, Lianxiang Long, Xiaoyue Yu, Hongyu Cai, Pengyun Chen, Lijiao Gu and Minsheng Yang
    Citation: BMC Genomic Data 2023 24:55
  39. Cells orchestrate histone biogenesis with strict temporal and quantitative control. To efficiently regulate histone biogenesis, the repetitive Drosophila melanogaster replication-dependent histone genes are array...

    Authors: Lauren J. Hodkinson, Connor Smith, H. Skye Comstra, Bukola A. Ajani, Eric H. Albanese, Kawsar Arsalan, Alvaro Perez Daisson, Katherine B. Forrest, Elijah H. Fox, Matthew R. Guerette, Samia Khan, Madeleine P. Koenig, Shivani Lam, Ava S. Lewandowski, Lauren J. Mahoney, Nasserallah Manai…
    Citation: BMC Genomic Data 2023 24:54
  40. Peucedanum praeruptorum Dunn, a traditional Chinese herbal medicine, contains coumarin and volatile oil components that have clinical application value. However, early bolting often occurs in the medicinal mater...

    Authors: Cheng Song, Yingyu Zhang, Yunpeng Zhang, Shanyong Yi, Haoyu Pan, Ranran Liao, Yuanyuan Wang and Bangxing Han
    Citation: BMC Genomic Data 2023 24:53

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