Population Reference Bureau. [http://www.prb.org]
Bittles AH: Endogamy, consanguinity and community disease profiles. Community Genet. 2005, 8 (1): 17-20. 10.1159/000083332.
CAS
PubMed
Google Scholar
Mosely C, Asher RE: Atlas of the World's Languages. 2007, London , Routledge, 2nd
Google Scholar
Thapar R: A history of India: Volume I. 1990, London, UK , Penguin Books.
Google Scholar
Taraporevala S: Zoroastrians of India. Parsis: A Photographic Journey. 2000, Mumbai, India , Good Books
Google Scholar
Taraporevala S: Parsis: The Zoroastrians of India: A Photographic Journey. 2004, Mumbai, India , Good Books
Google Scholar
Qamar R, Ayub Q, Mohyuddin A, Helgason A, Mazhar K, Mansoor A, Zerjal T, Tyler-Smith C, Mehdi SQ: Y-chromosomal DNA variation in Pakistan. Am J Hum Genet. 2002, 70 (5): 1107-1124. 10.1086/339929.
PubMed Central
CAS
PubMed
Google Scholar
Quintana-Murci L, Chaix R, Wells RS, Behar DM, Sayar H, Scozzari R, Rengo C, Al-Zahery N, Semino O, Santachiara-Benerecetti AS, Coppa A, Ayub Q, Mohyuddin A, Tyler-Smith C, Qasim Mehdi S, Torroni A, McElreavey K: Where west meets east: the complex mtDNA landscape of the southwest and Central Asian corridor. Am J Hum Genet. 2004, 74 (5): 827-845. 10.1086/383236.
PubMed Central
CAS
PubMed
Google Scholar
Di Rienzo A, Hudson RR: An evolutionary framework for common diseases: the ancestral-susceptibility model. Trends Genet. 2005, 21 (11): 596-601. 10.1016/j.tig.2005.08.007.
CAS
PubMed
Google Scholar
Rosenberg NA, Mahajan S, Gonzales-Quevedo C, Nino-Rosales L, Ninis V, Das P, Hedge M, Molinari L, Zapata G, Weber JL, Belmont JW, Patel PI: Low levels of genetic divergence across populations of India. PLoS Genet. 2006, 2 (12): e215-10.1371/journal.pgen.0020215.
PubMed Central
PubMed
Google Scholar
Wilson PW, Christiansen JC, Anderson KM, Kannel WB: Impact of national guidelines for cholesterol risk factor screening. The Framingham Offspring Study. J Am Medical Assoc. 1989, 262 (1): 41-44. 10.1001/jama.262.1.41.
CAS
Google Scholar
Enas EA: Prevalence of coronary heart disease and its risk factors in Asian Indian migrants to the United States. Proc Int Symp Atherosclerosis. 1991, 6-11.
Google Scholar
Enas EA, Mehta J: Malignant coronary artery disease in young Asian Indians: thoughts on pathogenesis, prevention, and therapy. Coronary Artery Disease in Asian Indians (CADI) study. Clin Cardiol. 1995, 18 (3): 131-135.
CAS
PubMed
Google Scholar
Enas EA, Garg A, Davidson MA, Nair VM, Huet BA, Yusuf S: Coronary heart disease and its risk factors in first-generation immigrant Asian Indians to the United States of America. Indian Heart J. 1996, 48 (4): 343-353.
CAS
PubMed
Google Scholar
Enas EA, Senthilkumar A: Coronary Artery Disease in Asian Indians: An Update and Review. The Internet Journal of Cardiology. 2001, 1 (2):
Gupta R, Prakash H, Majumdar S, Sharma S, Gupta VP: Prevalence of coronary heart disease and coronary risk factors in an urban population of Rajasthan. Indian Heart J. 1995, 47 (4): 331-338.
CAS
PubMed
Google Scholar
Deepa M, Farooq S, Datta M, Deepa R, Mohan V: Prevalence of metabolic syndrome using WHO, ATPIII and IDF definitions in Asian Indians: the Chennai Urban Rural Epidemiology Study (CURES-34). Diabetes Metab Res Rev. 2007, 23 (2): 127-134. 10.1002/dmrr.658.
CAS
PubMed
Google Scholar
Gupta R: Meta-analysis of prevalence of hypertension in India. Indian Heart J. 1997, 49 (1): 43-48.
CAS
PubMed
Google Scholar
Kearney PM, Whelton M, Reynolds K, Whelton PK, He J: Worldwide prevalence of hypertension: a systematic review. J Hypertens. 2004, 22 (1): 11-19. 10.1097/00004872-200401000-00003.
CAS
PubMed
Google Scholar
Gupta R, Misra A: Type 2 Diabetes in India: Regional Disparities. Br J Diabetes Vasc Dis. 2007, 7 (1): 12-16.
Google Scholar
Mohan V, Deepa M, Deepa R, Shanthirani CS, Farooq S, Ganesan A, Datta M: Secular trends in the prevalence of diabetes and impaired glucose tolerance in urban South India--the Chennai Urban Rural Epidemiology Study (CURES-17). Diabetologia. 2006, 49 (6): 1175-1178. 10.1007/s00125-006-0219-2.
CAS
PubMed
Google Scholar
Ramachandran A, Snehalatha C, Latha E, Vijay V, Viswanathan M: Rising prevalence of NIDDM in an urban population in India. Diabetologia. 1997, 40 (2): 232-237. 10.1007/s001250050668.
CAS
PubMed
Google Scholar
Ramachandran A, Snehalatha C, Kapur A, Vijay V, Mohan V, Das AK, Rao PV, Yajnik CS, Prasanna Kumar KM, Nair JD: High prevalence of diabetes and impaired glucose tolerance in India: National Urban Diabetes Survey. Diabetologia. 2001, 44 (9): 1094-1101. 10.1007/s001250100627.
CAS
PubMed
Google Scholar
Hirschsprung H: Stuhltragheit Neugeborener in Folge von Dilatation und Hypertrophie des Colons. Jahrb Kinderheilk. 1888, 27: 1-7.
Google Scholar
Watanatittan S, Suwatanaviroj A, Niramis R, Limprutithum T: Hirschsprung's disease : Diagnostic experience. Bulletin of the Department of Medical Services. 1991, 16 (1): 9-20.
Google Scholar
Streiff EB, Babel J: La senescence de la retine. Prog Ophthal. 1963, 13: 1-75.
Google Scholar
Krishnaiah S, Das T, Nirmalan PK, Nutheti R, Shamanna BR, Rao GN, Thomas R: Risk Factors for Age-Related Macular Degeneration: Findings from the Andhra Pradesh Eye Disease Study in South India. Invest Ophthalmol Vis Sci. 2005, 46 (12): 4442-4449. 10.1167/iovs.05-0853.
PubMed
Google Scholar
Hsing AW, Tsao L, Devesa SS: International trends and patterns of prostate cancer incidence and mortality. Int J Cancer. 2000, 85 (1): 60-67. 10.1002/(SICI)1097-0215(20000101)85:1<60::AID-IJC11>3.0.CO;2-B.
CAS
PubMed
Google Scholar
Quinn M, Babb P: Patterns and trends in prostate cancer incidence, survival, prevalence and mortality. Part I: international comparisons. BJU International. 2002, 90 (2): 162-173. 10.1046/j.1464-410X.2002.2822.x.
CAS
PubMed
Google Scholar
Ramachandran A, Snehalatha C, Abdul Khader OM, Joseph TA, Viswanathan M: Prevalence of childhood diabetes in an urban population in south India. Diabetes Res Clin Pract. 1992, 17 (3): 227-231. 10.1016/0168-8227(92)90098-C.
CAS
PubMed
Google Scholar
Ramachandran A, Snehalatha C, Krishnaswamy CV: Incidence of IDDM in children in urban population in Southern India. Diabetes Res Clin Pract. 1996, 34 (2): 79-82. 10.1016/S0168-8227(96)01338-1.
CAS
PubMed
Google Scholar
Amos AF, McCarty DJ, Zimmet P: The rising global burden of diabetes and its complications: estimates and projections to the year 2010. Diabet Med. 1997, 14 Suppl 5: S1-85.
CAS
PubMed
Google Scholar
Garcia-Barcelo MM, Sham MH, Lui VC, Chen BL, Song YQ, Lee WS, Yung SK, Romeo G, Tam PK: Chinese patients with sporadic Hirschsprung's disease are predominantly represented by a single RET haplotype. J Med Genet. 2003, 40 (11): e122-10.1136/jmg.40.11.e122.
PubMed Central
PubMed
Google Scholar
Gronberg H: Prostate cancer epidemiology. Lancet. 2003, 361 (9360): 859-864. 10.1016/S0140-6736(03)12713-4.
PubMed
Google Scholar
Kim UK, Breslin PAS, Reed D, Drayna D: Genetics of Human Taste Perception. J Dent Res. 2004, 83 (6): 448-453.
PubMed
Google Scholar
Meza-Valencia BE, de Lorimier AJ, Person DA: Hirschsprung disease in the U.S. associated Pacific Islands: more common than expected. Hawaii Med J. 2005, 64 (4): 96-98.
PubMed
Google Scholar
Vinereanu D: Risk factors for atherosclerotic disease: present and future. Herz. 2006, 31 Suppl 3: 5-24.
PubMed
Google Scholar
Young JH: Evolution of blood pressure regulation in humans. Curr Hypertens Rep. 2007, 9 (1): 13-18. 10.1007/s11906-007-0004-8.
PubMed
Google Scholar
Klein R: Overview of progress in the epidemiology of age-related macular degeneration. Ophthalmic Epidemiol. 2007, 14 (4): 184-187. 10.1080/09286580701344381.
PubMed
Google Scholar
Asleh SA, Chowers I: Ethnic background as a risk factor for advanced age-related macular degeneration in Israel. Isr Med Assoc J. 2007, 9 (9): 656-658.
PubMed
Google Scholar
World Health Organization. [http://www.who.int/]
Procopiou M, Philippe J: The metabolic syndrome and type 2 diabetes: epidemiological figures and country specificities. Cerebrovasc Dis. 2005, 20 (Suppl 1): 2-8. 10.1159/000088231.
PubMed
Google Scholar
Wild S, Sicree R, Roglic G, Green A, King H: Global Prevalence of Diabetes - Estimates for the year 2000 and projections for 2030. Diabetes Care. 2004, 27 (5): 1047-1053. 10.2337/diacare.27.5.1047.
PubMed
Google Scholar
Motulsky AG, Brunzell JD: Genetics of coronary atherosclerosis. The genetic basis of common diseases. Edited by: King RA, Rotter JI, Motulsky AG. 2002, New York, NY , Oxford University Press, 105 -1126. Second edition
Google Scholar
Gillespie KM: Type 1 diabetes: pathogenesis and prevention. Canadian Med Assoc J. 2006, 175 (2): 165-170. 10.1503/cmaj.060244.
Google Scholar
Wolford JK, Vozarova de Courten B: Genetic basis of type 2 diabetes mellitus: implications for therapy. Treat Endocrinol. 2004, 3 (4): 257-267. 10.2165/00024677-200403040-00007.
CAS
PubMed
Google Scholar
Staessen JA, Wang J, Bianchi G, Birkenhager WH: Essential hypertension. The Lancet. 2003, 361 (9369): 1629-1641. 10.1016/S0140-6736(03)13302-8.
Google Scholar
Bostwick DG, Burke HB, Djakiew D, Euling S, Ho S, Landolph J, Morrison H, Sonawane B, Shifflett T, Waters DJ, Timms B: Human prostate cancer risk factors. Cancer. 2004, 101 (S10): 2371-2490. 10.1002/cncr.20408.
CAS
PubMed
Google Scholar
Chamberlain M, Baird P, Dirani M, Guymer R: Unraveling A Complex Genetic Disease: Age-related Macular Degeneration. Surv Ophthalmol. 2006, 51 (6): 576-586. 10.1016/j.survophthal.2006.08.003.
PubMed
Google Scholar
Thompson EE, Kuttab-Boulos H, Witonsky D, Yang L, Roe BA, Di Rienzo A: CYP3A variation and the evolution of salt-sensitivity variants. Am J Hum Genet. 2004, 75 (6): 1059-1069. 10.1086/426406.
PubMed Central
CAS
PubMed
Google Scholar
Roy JN, Lajoie J, Zijenah LS, Barama A, Poirier C, Ward BJ, Roger M: CYP3A5 genetic polymorphims in different ethnic populations. Drug Metab Dispos. 2005, 33 (7): 884-887. 10.1124/dmd.105.003822.
CAS
PubMed
Google Scholar
Siffert W, Forster P, Jockel KH, Mvere DA, Brinkmann B, Naber C, Crookes R, Heyns ADP, Epplen JT, Fridey JOY, Freedman BI, Muller N, Stolke D, Sharma AM, Moutaery KA, Grosse-Wilde H, Buerbaum B, Ehrlich T, Ahmad HR, Horsthemke B, Du Toit ED, Tiilikainen A, Ge J, Wang Y, Yang D, Husing J, Rosskopf D: Worldwide Ethnic Distribution of the G Protein {beta}3 Subunit 825T Allele and Its Association with Obesity in Caucasian, Chinese, and Black African Individuals. J Am Soc Nephrol. 1999, 10 (9): 1921-1930.
CAS
PubMed
Google Scholar
Siffert W: G protein {beta}3 subunit 825T allele, hypertension, obesity, and diabetic nephropathy. Nephrol Dial Transplant. 2000, 15 (9): 1298-1306. 10.1093/ndt/15.9.1298.
CAS
PubMed
Google Scholar
Rosskopf D, Manthey I, Siffert W: Identification and ethnic distribution of major haplotypes in the gene GNB3 encoding the G-protein beta3 subunit. Pharmacogenetics. 2002, 12 (3): 209-220. 10.1097/00008571-200204000-00005.
CAS
PubMed
Google Scholar
Beeks E, Kessels AG, Kroon AA, van der Klauw MM, de Leeuw PW: Genetic predisposition to salt-sensitivity: a systematic review. J Hypertens. 2004, 22 (7): 1243-1249. 10.1097/01.hjh.0000125443.28861.0d.
CAS
PubMed
Google Scholar
Young JH, Chang YPC, Kim JDO, Chretien JP, Klag MJ, Levine MA, Ruff CB, Wang NY, Chakravarti A: Differential Susceptibility to Hypertension Is Due to Selection during the Out-of-Africa Expansion. PLoS Genetics. 2005, 1 (6): e82-10.1371/journal.pgen.0010082.
PubMed Central
PubMed
Google Scholar
Dwyer JH, Allayee H, Dwyer KM, Fan J, Wu H, Mar R, Lusis AJ, Mehrabian M: Arachidonate 5-lipoxygenase promoter genotype, dietary arachidonic acid, and atherosclerosis. New Engl J Med. 2004, 350 (1): 29-37. 10.1056/NEJMoa025079.
CAS
PubMed
Google Scholar
Amundadottir LT, Sulem P, Gudmundsson J, Helgason A, Baker A, Agnarsson BA, Sigurdsson A, Benediktsdottir KR, Cazier JB, Sainz J, Jakobsdottir M, Kostic J, Magnusdottir DN, Ghosh S, Agnarsson K, Birgisdottir B, Le Roux L, Olafsdottir A, Blondal T, Andresdottir M, Gretarsdottir OS, Bergthorsson JT, Gudbjartsson D, Gylfason A, Thorleifsson G, Manolescu A, Kristjansson K, Geirsson G, Isaksson H, Douglas J, Johansson JE, Balter K, Wiklund F, Montie JE, Yu X, Suarez BK, Ober C, Cooney KA, Gronberg H, Catalona WJ, Einarsson GV, Barkardottir RB, Gulcher JR, Kong A, Thorsteinsdottir U, Stefansson K: A common variant associated with prostate cancer in European and African populations. Nat Genet. 2006, 38 (6): 652-658. 10.1038/ng1808.
CAS
PubMed
Google Scholar
Kim U, Jorgenson E, Coon H, Leppert M, Risch N, Drayna D: Positional cloning of the human quantitative trait locus underlying taste sensitivity to phenylthiocarbamide. Science. 2003, 299 (5610): 1221-1225. 10.1126/science.1080190.
CAS
PubMed
Google Scholar
Wooding S, Kim UK, Bamshad MJ, Larsen J, Jorde LB, Drayna D: Natural selection and molecular evolution in PTC, a bitter-taste receptor gene. Am J Hum Genet. 2004, 74 (4): 637-646. 10.1086/383092.
PubMed Central
CAS
PubMed
Google Scholar
Ranade K, Chang MS, Ting CT, Pei D, Hsiao CF, Olivier M, Pesich R, Hebert J, Chen YD, Dzau VJ, Curb D, Olshen R, Risch N, Cox DR, Botstein D: High-throughput genotyping with single nucleotide polymorphisms. Genome Res. 2001, 11 (7): 1262-1268.
PubMed Central
CAS
PubMed
Google Scholar
Bamshad M, Kivisild T, Watkins WS, Dixon ME, Ricker CE, Rao BB, Naidu JM, Prasad BVR, Reddy PG, Rasanayagam A, Papiha SS, Villems R, Redd AJ, Hammer MF, Nguyen SV, Carroll ML, Batzer MA, Jorde LB: Genetic Evidence on the Origins of Indian Caste Populations. Genome Res. 2001, 11 (6): 994-1004. 10.1101/gr.GR-1733RR.
PubMed Central
CAS
PubMed
Google Scholar
Basu A, Mukherjee N, Roy S, Sengupta S, Banerjee S, Chakraborty M, Dey B, Roy M, Roy B, Bhattacharyya NP, Roychoudhury S, Majumder PP: Ethnic India: A Genomic View, With Special Reference to Peopling and Structure. Genome Res. 2003, 13 (10): 2277-2290. 10.1101/gr.1413403.
PubMed Central
CAS
PubMed
Google Scholar
Partha PM: People of India: Biological diversity and affinities. Evolutionary Anthropology: Issues, News, and Reviews. 1998, 6 (3): 100-110. 10.1002/(SICI)1520-6505(1998)6:3<100::AID-EVAN4>3.0.CO;2-I.
Google Scholar
Cann RL: Genetic Clues to Dispersal in Human Populations: Retracing the Past from the Present. Science. 2001, 291 (5509): 1742-1748. 10.1126/science.1058948.
CAS
PubMed
Google Scholar
Gupta R, Gupta VP, Sarna M, Bhatnagar S, Thanvi J, Sharma V, Singh AK, Gupta JB, Kaul V: Prevalence of coronary heart disease and risk factors in an urban Indian population: Jaipur Heart Watch-2. Indian Heart J. 2002, 54: 59-66.
PubMed
Google Scholar
Bodhini D, Radha V, Dhar M, Narayani N, Mohan V: The rs12255372(G/T) and rs7903146(C/T) polymorphisms of the TCF7L2 gene are associated with type 2 diabetes mellitus in Asian Indians. Metabolism. 2007, 56 (9): 1174-1178. 10.1016/j.metabol.2007.04.012.
CAS
PubMed
Google Scholar
Chandak GR, Janipalli CS, Bhaskar S, Kulkarni SR, Mohankrishna P, Hattersley AT, Frayling TM, Yajnik CS: Common variants in the TCF7L2 gene are strongly associated with type 2 diabetes mellitus in the Indian population. Diabetologia. 2007, 50 (1): 63-67. 10.1007/s00125-006-0502-2.
CAS
PubMed
Google Scholar
Ray D, Tomar N, Gupta N, Goswami R: Protein tyrosine phosphatase non-receptor type 22 (PTPN22) gene R620W variant and sporadic idiopathic hypoparathyroidism in Asian Indians. Int J Immunogenet. 2006, 33 (4): 237-240. 10.1111/j.1744-313X.2006.00604.x.
CAS
PubMed
Google Scholar
Prodi DA, Drayna D, Forabosco P, Palmas MA, Maestrale GB, Piras D, Pirastu M, Angius A: Bitter Taste Study in a Sardinian Genetic Isolate Supports the Association of Phenylthiocarbamide Sensitivity to the TAS2R38 Bitter Receptor Gene. Chem Senses. 2004, 29 (8): 697-702. 10.1093/chemse/bjh074.
CAS
PubMed
Google Scholar
Ghoshi AK: ABO blood groups and PTC taste sensitivity among the Kota of Nilgiri Hills. Hum Hered. 1973, 23 (1): 78-82.
CAS
PubMed
Google Scholar
Hakim SM, Baxi AJ, Balakrishnan V, Kulkarni KV, Rao SS, Jhala HI: Blood groups, secretor status and ability to taste phenylthiocarbamide in some Muslim groups. Hum Hered. 1973, 23 (1): 72-77.
CAS
PubMed
Google Scholar
Kapoor AK, Seth PK: Taste sensitivity to PTC in the Rajputs of Narendra Nagar (Uttar Pradesh, India). Hum Hered. 1981, 31 (2): 124-125.
CAS
PubMed
Google Scholar
Mathur VD, Mathur S, Bahadur B: Taste deficiency for phenylthiocarbamide in Mathur Kayasths community of Hyderabad, A.P. Indian J Physiol Pharmacol. 1983, 27 (2): 92-100.
CAS
PubMed
Google Scholar
Bhatkar RS, Nallulwar SC, Katti VA: The study of tasters and non-tasters of phenyl-thio-carbamide (PTC) and its relation to blood groups. Indian J Physiol Pharmacol. 1989, 33 (3): 168-170.
CAS
PubMed
Google Scholar
Kim UK, Drayna D: Genetics of individual differences in bitter taste perception: lessons from the PTC gene. Clin Genet. 2005, 67 (4): 275-280. 10.1111/j.1399-0004.2004.00361.x.
CAS
PubMed
Google Scholar
Wooding S, Bufe B, Grassi C, Howard MT, Stone AC, Vazquez M, Dunn DM, Meyerhof W, Weiss RB, Bamshad MJ: Independent evolution of bitter-taste sensitivity in humans and chimpanzees. Nature. 2006, 440 (7086): 930-934. 10.1038/nature04655.
CAS
PubMed
Google Scholar
Tepper BJ: 6-n-Propylthiouracil: a genetic marker for taste, with implications for food preference and dietary habits. Am J Hum Genet. 1998, 63 (5): 1271-1276. 10.1086/302124.
PubMed Central
CAS
PubMed
Google Scholar
Billing J, Sherman PW: Antimicrobial functions of spices: why some like it hot. Q Rev Biol. 1998, 73 (1): 3-49. 10.1086/420058.
CAS
PubMed
Google Scholar
Kim U, Wooding S, Ricci D, Jorde LB, Drayna D: Worldwide haplotype diversity and coding sequence variation at human bitter taste receptor loci. Human Mutation. 2005, 26 (3): 199-204. 10.1002/humu.20203.
CAS
PubMed
Google Scholar
Sturm RA: A golden age of human pigmentation genetics. Trends in Genetics. 2006, 22 (9): 464-468. 10.1016/j.tig.2006.06.010.
CAS
PubMed
Google Scholar
Rosenberg NA, Burke T, Elo K, Feldman MW, Freidlin PJ, Groenen MAM, Hillel J, Maki-Tanila A, Tixier-Boichard M, Vignal A, Wimmers K, Weigend S: Empirical Evaluation of Genetic Clustering Methods Using Multilocus Genotypes From 20 Chicken Breeds. Genetics. 2001, 159 (2): 699-713.
PubMed Central
CAS
PubMed
Google Scholar
Ramachandran S, Rosenberg NA, Zhivotovsky LA, Feldman MW: Robustness of the inference of human population structure: a comparison of X-chromosomal and autosomal microsatellites. Hum Genomics. 2004, 1 (2): 87-97.
PubMed Central
CAS
PubMed
Google Scholar
Rosenberg NA, Calabrese PP: Polyploid and multilocus extensions of the Wahlund inequality. Theo Pop Biol. 2004, 66 (4): 381-391. 10.1016/j.tpb.2004.07.001.
Google Scholar
In KH, Asano K, Beier D, Grobholz J, Finn PW, Silverman EK, Silverman ES, Collins T, Fischer AR, Keith TP, Serino K, Kim SW, De Sanctis GT, Yandava C, Pillari A, Rubin P, Kemp J, Israel E, Busse W, Ledford D, Murray JJ, Segal A, Tinkleman D, Drazen JM: Naturally Occurring Mutations in the Human 5-Lipoxygenase Gene Promoter That Modify Transcription Factor Binding and Reporter Gene Transcription. J Clin Invest. 1997, 99 (5): 1130-1137. 10.1172/JCI119241.
PubMed Central
CAS
PubMed
Google Scholar
Brownstein MJ, Carpten JD, Smith JR: Modulation of Non-Templated Nucleotide Addition by Taq DNA Polymerase: Primer Modifications that Facilitate Genotyping. BioTechniques. 1996, 20 (6): 1004-1010.
CAS
PubMed
Google Scholar
Scheet P, Stephens M: A Fast and Flexible Statistical Model for Large-Scale Population Genotype Data: Applications to Inferring Missing Genotypes and Haplotypic Phase. Am J Hum Genet. 2006, 78 (4): 629-644. 10.1086/502802.
PubMed Central
CAS
PubMed
Google Scholar
Stephens M, Smith NJ, Donnelly P: A new statistical method for haplotype reconstruction from population data. Am J Hum Genet. 2001, 68 (4): 978-989. 10.1086/319501.
PubMed Central
CAS
PubMed
Google Scholar
Stephens M, Scheet P: Accounting for Decay of Linkage Disequilibrium in Haplotype Inference and Missing-Data Imputation. Am J Hum Genet. 2005, 76 (3): 449-462. 10.1086/428594.
PubMed Central
CAS
PubMed
Google Scholar
Stephens M, Donnelly P: A comparison of bayesian methods for haplotype reconstruction from population genotype data. Am J Hum Genet. 2003, 73 (5): 1162-1169. 10.1086/379378.
PubMed Central
CAS
PubMed
Google Scholar
R Development Core Team: R: A language and environment for statistical computing. 2006, Vienna, Austria , R Foundation for Statistical Computing, [http://www.R-project.org]
Google Scholar
Warnes G, Leisch F: genetics: Population Genetics. R package version 1.2.0. 2005
Google Scholar
Weir BS, Cockerham CC: Estimating F-statitsics for the analysis of population-structure. Evolution. 1984, 38 (6): 1358-1370. 10.2307/2408641.
Google Scholar
Akey JM, Zhang G, Zhang K, Jin L, Shriver MD: Interrogating a High-Density SNP Map for Signatures of Natural Selection. Genome Res. 2002, 12 (12): 1805-1814. 10.1101/gr.631202.
PubMed Central
CAS
PubMed
Google Scholar
Goudet J: Fstat version 1.2: a computer program to calculate Fstatistics. J Hered. 1995, 86 (6): 485-486.
Google Scholar
Weir BS: Genetic Data Analysis II. 1996, Sunderland, MA , Sinauer Associates, 2nd
Google Scholar
Sherry ST, Ward MH, Kholodov M, Baker J, Phan L, Smigielski EM, Sirotkin K: dbSNP: the NCBI database of genetic variation. Nucl Acids Res. 2001, 29 (1): 308-311. 10.1093/nar/29.1.308.
PubMed Central
CAS
PubMed
Google Scholar
Database of Single Nucleotide Polymorphisms (dbSNP). Bethesda (MD): National Center for Biotechnology Information, National Library of Medicine. (dbSNP Build ID: 126). [http://www.ncbi.nlm.nih.gov/SNP/]
Carter K, McCaskie P, Palmer L: JLIN: A java based linkage disequilibrium plotter. BMC Bioinformatics. 2006, 7 (1): 60-10.1186/1471-2105-7-60.
PubMed Central
PubMed
Google Scholar
Jeunemaitre X, Charru A, Chatellier G, Dumont C, Sassano P, Soubrier F, Menard J, Corvol P: M235T variant of the human angiotensinogen gene in unselected hypertensive patients. J Hypertens Suppl. 1993, 11 (5): S80-S81. 10.1097/00004872-199312050-00019.
CAS
PubMed
Google Scholar
Givens RC, Lin YS, Dowling ALS, Thummel KE, Lamba JK, Schuetz EG, Stewart PW, Watkins PB: CYP3A5 genotype predicts renal CYP3A activity and blood pressure in healthy adults. J Appl Physiol. 2003, 95 (3): 1297-1300.
CAS
PubMed
Google Scholar
Evans JC, Frayling TM, Cassell PG, Saker PJ, Hitman GA, Walker M, Levy JC, O'Rahilly S, Rao PV, Bennett AJ, Jones EC, Menzel S, Prestwich P, Simecek N, Wishart M, Dhillon R, Fletcher C, Millward A, Demaine A, Wilkin T, Horikawa Y, Cox NJ, Bell GI, Ellard S, McCarthy MI, Hattersley AT: Studies of association between the gene for calpain-10 and type 2 diabetes mellitus in the United Kingdom. Am J Hum Genet. 2001, 69 (3): 544-552. 10.1086/323315.
PubMed Central
CAS
PubMed
Google Scholar
Grant SFA, Thorleifsson G, Reynisdottir I, Benediktsson R, Manolescu A, Sainz J, Helgason A, Stefansson H, Emilsson V, Helgadottir A, Styrkarsdottir U, Magnusson KP, Walters GB, Palsdottir E, Jonsdottir T, Gudmundsdottir T, Gylfason A, Saemundsdottir J, Wilensky RL, Reilly MP, Rader DJ, Bagger Y, Christiansen C, Gudnason V, Sigurdsson G, Thorsteinsdottir U, Gulcher JR, Kong A, Stefansson K: Variant of transcription factor 7-like 2 (TCF7L2) gene confers risk of type 2 diabetes. Nat Genet. 2006, 38 (3): 320-323. 10.1038/ng1732.
CAS
PubMed
Google Scholar
Bottini N, Musumeci L, Alonso A, Rahmouni S, Nika K, Rostamkhani M, MacMurray J, Meloni GF, Lucarelli P, Pellecchia M, Eisenbarth GS, Comings D, Mustelin T: A functional variant of lymphoid tyrosine phosphatase is associated with type I diabetes. Nat Genet. 2004, 36 (4): 337-338. 10.1038/ng1323.
CAS
PubMed
Google Scholar
Haines JL, Hauser MA, Schmidt S, Scott WK, Olson LM, Gallins P, Spencer KL, Kwan SY, Noureddine M, Gilbert JR, Schnetz-Boutaud N, Agarwal A, Postel EA, Pericak-Vance MA: Complement Factor H Variant Increases the Risk of Age-Related Macular Degeneration. Science. 2005, 308 (5720): 419-421. 10.1126/science.1110359.
CAS
PubMed
Google Scholar
Edwards AO, Ritter R, Abel KJ, Manning A, Panhuysen C, Farrer LA: Complement Factor H Polymorphism and Age-Related Macular Degeneration. Science. 2005, 308 (5720): 421-424. 10.1126/science.1110189.
CAS
PubMed
Google Scholar
Klein RJ, Zeiss C, Chew EY, Tsai JY, Sackler RS, Haynes C, Henning AK, SanGiovanni JP, Mane SM, Mayne ST, Bracken MB, Ferris FL, Ott J, Barnstable C, Hoh J: Complement Factor H Polymorphism in Age-Related Macular Degeneration. Science. 2005, 308 (5720): 385-389. 10.1126/science.1109557.
PubMed Central
CAS
PubMed
Google Scholar
Rivera A, Fisher SA, Fritsche LG, Keilhauer CN, Lichtner P, Meitinger T, Weber BHF: Hypothetical LOC387715 is a second major susceptibility gene for age-related macular degeneration, contributing independently of complement factor H to disease risk. Hum Mol Genet. 2005, 14 (21): 3227-3236. 10.1093/hmg/ddi353.
CAS
PubMed
Google Scholar
Emison ES, McCallion AS, Kashuk CS, Bush RT, Grice E, Lin S, Portnoy ME, Cutler DJ, Green ED, Chakravarti A: A common sex-dependent mutation in a RET enhancer underlies Hirschsprung disease risk. Nature. 2005, 434 (7035): 857-863. 10.1038/nature03467.
CAS
PubMed
Google Scholar
Lamason RL, Mohideen MAPK, Mest JR, Wong AC, Norton HL, Aros MC, Jurynec MJ, Mao X, Humphreville VR, Humbert JE, Sinha S, Moore JL, Jagadeeswaran P, Zhao W, Ning G, Makalowska I, McKeigue PM, O'Donnell D, Kittles R, Parra EJ, Mangini NJ, Grunwald DJ, Shriver MD, Canfield VA, Cheng KC: SLC24A5, a Putative Cation Exchanger, Affects Pigmentation in Zebrafish and Humans. Science. 2005, 310 (5755): 1782-1786. 10.1126/science.1116238.
CAS
PubMed
Google Scholar