Table 1 Whole-genome sequence statistics of thirty-tree Ln. lactis strains
Strain | Assembly Accession Number | Isolation Source | Sequencing Technology | Size(Mb) | GC% |
|---|---|---|---|---|---|
CBA3622 | GCA_007954625.1 | Kimchi | PacBio RSII | 1.78764 | 42.9 |
WiKim40 | GCA_001698145.1 | Kimchi | PacBio | 1.78807 | 43.1 |
CBA3625 | GCA_007954605.1 | Kimchi | PacBio RSII | 1.79161 | 43.3 |
CBA3626 | GCA_007954665.1 | Kimchi | PacBio RSII | 1.83981 | 43.1 |
UBA8811 | GCA_003529125.1 | Food | Illumina MiSeq | 1.57941 | 43.5 |
JCM 6123 | GCA_019656035.1 | Milk | Illumina NovaSeq | 1.61525 | 43.5 |
NBRC 12455 | GCA_006539105.1 | Not available | Illumina HiSeq 1000 | 1.64349 | 43.5 |
JCM 6123 | GCA_014651235.1 | Not available | Illumina HiSeq X Ten | 1.64888 | 43.3 |
MSK.22.141 | GCA_020708975.1 | Fecal sample | Illumina HiSeq | 1.68437 | 43.4 |
KACC 91922 | GCA_000709265.1 | Kimchi | Illumina MiSeq | 1.68817 | 43.4 |
MSK.22.137 | GCA_020708945.1 | Fecal sample | Illumina HiSeq | 1.69008 | 43.4 |
1.2.28 | GCA_018993775.1 | Cucumber fermentation brine | Illumina | 1.71216 | 43.4 |
KCTC 3773 | GCA_000179875.1 | Not available | 454 | 1.72068 | 42.9 |
LN19 | GCA_002092595.1 | Dairy | Illumina MiSeq | 1.72439 | 42.9 |
LN24 | GCA_002092695.1 | Dairy | Illumina MiSeq | 1.72466 | 42.9 |
aa_0143 | GCA_004167235.1 | Stool | Illumina HiSeq | 1.73814 | 43.2 |
AV1n | GCA_009795665.1 | Fruit | Illumina NovaSeq | 1.73819 | 43.2 |
CCK940 | GCA_002287365.1 | Kimchi | PacBio | 1.74151 | 43.3 |
BIOML-A1 | GCA_009678855.1 | Fecal material [ENVO:00002003] | Illumina NextSeq | 1.748 | 43.1 |
WIKIM21 | GCA_001411775.1 | Kimchi | 454 | 1.76143 | 43.1 |
SBC001 | GCA_014050705.1 | Green onion | PacBio RSII | 1.83516 | 43.1 |
KCTC 3528 | GCA_000185085.2 | Not available | 454 GS Titanium | 2.0112 | 42.6 |
UBA8466 | GCA_003521925.1 | Terrestrial | Illumina HiSeq 2500 | 1.21451 | 43.2 |
UBA5657 | GCA_002420925.1 | Metal | Illumina | 1.27472 | 42.6 |
UBA5028 | GCA_002416225.1 | Metal/plastic | Illumina | 1.30503 | 43.1 |
UBA6751 | GCA_002453615.1 | Metal/plastic | Illumina | 1.5482 | 43.2 |
UBA4605 | GCA_002386625.1 | Metal | Illumina | 1.55071 | 43.7 |
UBA4610 | GCA_002386555.1 | cloth | Illumina | 1.56779 | 43.5 |
UBA5566 | GCA_002425565.1 | Metal | Illumina | 1.57241 | 43.8 |
UBA5570 | GCA_002425485.1 | Wood | Illumina | 1.60419 | 43.5 |
UBA7653 | GCA_002483535.1 | Metal | Illumina | 1.60507 | 43.7 |
1001262B_160229_C9 | GCA_015551285.1 | Stool | Illumina HiSeq | 1.65714 | 43.6 |
1001095IJ_161003_G5 | GCA_015553465.1 | Stool | Illumina HiSeq | 1.67719 | 43.3 |