Mohammadabadi MR. Tissue-specific mRNA expression profile of ESR2 gene in goat. Agricultural Biotechnology Journal. 2021;12:169–84.
Masoudzadeh SH, Mohammadabadi M, Khezri A, Stavetska RV, Oleshko VP, Babenko OI, et al. Effects of diets with different levels of fennel (Foeniculum vulgare) seed powder on DLK1 gene expression in brain, adipose tissue, femur muscle and rumen of Kermani lambs. Small Ruminant Res. 2020;193: e106276.
Mohammadabadi M, Bordbar F, Jensen J, Du M, Guo W. Key genes regulating skeletal muscle development and growth in farm animals. Animals. 2021;11: e835.
Mohammadabadi MR, Asadollahpour NH. Leptin gene expression in Raini Cashmere goat using Real Time PCR. Agric Biotechnol. 2021;13:197–214.
Teixeira A, Silva S, Guedes C, Rodrigues S. Sheep and goat meat processed products quality: a review. Foods. 2020;9:970.
Ding LM, Chen JQ, Degen AA, Qiu Q, Liu PP, Dong QM, et al. Growth performance and hormonal status during feed restriction and compensatory growth of Small-Tail Han sheep in China. Small Ruminant Res. 2016;144:191–6.
Di R, Chu MX, Li YL, Zhang L, Fang L, Feng T, et al. Predictive potential of microsatellite markers on heterosis of fecundity in crossbred sheep. Mol Biol Rep. 2012;39:2761–6.
Ma WD, Miao ZS, Novotny MV. Role of the adrenal glands and adrenal-mediated Chemo signals in suppression of estrus in the house mouse: The Lee-Boot effect revisited. Novotny Milos. 1998;59:1317–20.
Ma W, Miao Z, Novotny MV. Role of the adrenal gland and adrenal-mediated chemosignals in suppression of estrus in the house mouse: the lee-boot effect revisited. Biol Reprod. 1998;59:1317–20.
Hillier SG, Tetsuka M. An anti-inflammatory role for glucocorticoids in the ovaries? J Reprod Immunol. 1998;39:21–7.
Fanson KV, Parrott ML. The value of eutherian-marsupial comparisons for understanding the function of glucocorticoids in female mammal reproduction. Horm Behav. 2015;76:41–7.
Qi MY, Xu LQ, Zhang JN, Li MO, Lu MH, Yao YC. Effect of the Booroola fecundity (FecB) gene on the reproductive performance of ewes under assisted reproduction. Theriogenology. 2020;142:246–50.
Chu M, Jia L, Zhang Y, Jin M, Chen H, Fang L, et al. Polymorphisms of coding region of BMPR-IB gene and their relationship with litter size in sheep. Mol Biol Rep. 2011;38:4071–6.
Barazandeh A, Mohammadabadi MR, Ghaderi-Zefrehei M, Rafeied F. Whole genome comparative analysis of CpG islands in camelid and other mammalian genomes. Mamm Biol. 2019;98:73–9.
Moradian H, Esmailizadeh AK, Asadi M, Mohammadabadi MR. Whole genome detection of recent selection signatures in Sarabi cattle: a unique Iranian taurine breed. Genes Genomics. 2019;42:2.
Ledda B, Ottaggio L, Izzotti A, Sukkar SG, Miele M. Small RNAs in eucaryotes: new clues for amplifying microRNA benefits. Cell Biosci. 2020;10:1.
Gu B, Liu H, Han Y, Chen Y, Jiang HZ. Integrated analysis of miRNA and mRNA expression profiles in 2-, 6-, and 12-month-old Small Tail Han Sheep ovaries reveals that oar-miR-432 downregulates RPS6KA1 expression. Gene. 2019;710:76–90.
Bai M, Sun LM, Jia C, Li JR, Han Y, Liu H, et al. Integrated analysis of miRNA and mRNA expression profiles reveals functional miRNA-targets in development testes of Small Tail Han Sheep. G3 (Bethesda, Md). 2019;9:523–33.
Jimena P, Castilla JA, Peran F, Ramirez JP Jr, FV, Molina R, et al. Adrenal hormones in human follicular fluid. Acta Endocrinol. 1992;127:403–6.
Magiakou MA, Mastorakos G, Webster E, Chrousos GP. The hypothalamic-pituitary adrenal axis and the female reproductive system. Ann N Y Acad Sci. 1997;816:42–56.
Gao Y, Chen F, Kong QQ, Ning SF, Yuan HJ, Lian HY, et al. Stresses on female mice impair oocyte developmental potential: effects of stress severity and duration on oocytes at the growing follicle stage. Reprod Sci. 2016;23:1148–57.
Yuan HJ, Han X, Nan H, Guo LW, Shuai G, Juan L, et al. Glucocorticoids impair oocyte developmental potential by triggering apoptosis of ovarian cells via activating the Fas system. Sci Rep. 2016;6:24036.
Whirledge S, Cidlowski JA. Glucocorticoids and reproduction: traffic control on the road to reproduction. Trends Endocrinol Metab. 2017;28:399–415.
Xia Q, Li Q, Gan S, Guo X, Zhang X, Zhang J, et al. Exploring the roles of fecundity-related long non-coding RNAs and mRNAs in the adrenal glands of small-tailed Han Sheep. BMC Genet. 2020;21:39.
Kamalidehghan B, Habibi M, Afjeh SS, Shoai M, Alidoost S, Almasi GR, et al. The importance of small non-coding RNAs in human reproduction: a review article. Appl Clin Genet. 2020;13:1–11.
Xing K, Gao MJ, Li X, Feng YH, Ge Y, Qi XL, et al. An integrated analysis of testis miRNA and mRNA transcriptome reveals important functional miRNA-targets in reproduction traits of roosters. Reprod Biol. 2020;20:433–40.
Tian F, Wang JP, Li YH, Yang CH, Zhang RT, Wang XG, et al. Integrated analysis of mRNA and miRNA in testis and cauda epididymidis reveals candidate molecular markers associated with reproduction in Dezhou donkey. Livest Sci. 2020;234: 103885.
Shu YL, Zhang HJ, Cai QJ, Tang D, Wang G, Liu T, et al. Integrated mRNA and miRNA expression profile analyses reveal the potential roles of sex-biased miRNA-mRNA pairs in gonad tissues of the Chinese concave-eared torrent frog (Odorrana tormota). J Exp Zool Part B. 2019;332:69–80.
Camille Melón L, Maguire J. GABAergic regulation of the HPA and HPG axes and the impact of stress on reproductive function. J Steroid Biochem. 2016;160:196–203.
Edward N, Simone P. Influences of the stress endocrine system on the reproductive endocrine axis in sheep (Ovis aries). Ital J Anim Sci. 2017;16:640–51.
Oyola MG, Handa RJ. Hypothalamic-pituitary-adrenal and hypothalamic-pituitary-gonadal axes: sex differences in regulation of stress responsivity. Stress (Amsterdam, Netherlands). 2017;20:476–94.
New MI, Rosenwaks Z. Introduction: Contemporary perspectives on congenital adrenal hyperplasia: impacts on reproduction. Fertil Steril. 2019;111:4–6.
Roush S, Slack FJ. The let-7 family of microRNAs. Trends Cell Biol. 2008;18:505–16.
Zhao W, Zheng J, Wei G, Yang K, Wang G, Sun X. miR-148a inhibits cell proliferation and migration through targeting ErbB3 in colorectal cancer. Oncol Lett. 2019;18:2530–6.
Guan MM, Rao QX, Huang ML, Wang LJ, Lin SD, Chen Q, et al. Long Noncoding RNA TP73-AS1 Targets MicroRNA-329-3p to Regulate Expression of the SMAD2 Gene in Human Cervical Cancer Tissue and Cell Lines. Med Sci Monit. 2019;25:8131–41.
Li Z, Yu X, Wang Y, Shen J, Wu WK, Liang J, et al. By downregulating TIAM1 expression, microRNA-329 suppresses gastric cancer invasion and growth. Oncotarget. 2015;6:17559–69.
Qin Y, Zhu W, Xu W, Zhang B, Shi S, Ji S, et al. LSD1 sustains pancreatic cancer growth via maintaining HIF1α-dependent glycolytic process. Cancer Lett. 2014;347:225–32.
Wang X, Lu X, Zhang T, Wen C, Shi M, Tang X, et al. mir-329 restricts tumor growth by targeting grb2 in pancreatic cancer. Oncotarget. 2016;7:21441–53.
Xiao B, Tan L, He B, Liu Z, Xu R. MiRNA-329 targeting E2F1 inhibits cell proliferation in glioma cells. J Transl Med. 2013;11:172.
An N, Luo X, Zhang M, Yu R. MicroRNA-376b promotes breast cancer metastasis by targeting Hoxd10 directly. Exp Ther Med. 2017;13:79–84.
Deng YW, Shu YG, Sun SL. miR-376a inhibits glioma proliferation and angiogenesis by regulating YAP1/VEGF signalling via targeting of SIRT1. Transl Oncol. 2022;15: 101270.
Huang B, Yu H, Li Y, Zhang W, Liu X. Upregulation of long noncoding TNFSF10 contributes to osteoarthritis progression through the miR-376-3p/FGFR1 axis. J Cell Biochem. 2019;120:19610–20.
Huang Q, Wang C, Hou Z, Wang G, Lv J, Wang H, et al. Serum microRNA-376 family as diagnostic and prognostic markers in human gliomas. Cancer Biomark. 2017;19:137–44.
Meng F, Liu J, Lu T, Zang L, Wang J, He Q, et al. SNHG1 knockdown upregulates miR-376a and downregulates FOXK1/Snail axis to prevent tumor growth and metastasis in HCC. Mol Ther Oncolytics. 2021;21:264–77.
Wu X, Li J, Ren Y, Zuo Z, Ni S, Cai J. MEG3 can affect the proliferation and migration of colorectal cancer cells through regulating miR-376/PRKD1 axis. Am J Transl Res. 2019;11:5740–51.
Yang L, Wei QM, Zhang XW, Sheng Q, Yan XT. MiR-376a promotion of proliferation and metastases in ovarian cancer: Potential role as a biomarker. Life Sci. 2017;173:62–7.
Zhang L, Yao M, Ma W, Jiang Y, Wang W. MicroRNA-376b-3p targets RGS1 mRNA to inhibit proliferation, metastasis, and apoptosis in osteosarcoma. Ann Transl Med. 2021;9:1652.
Paris G, Bouzid Y, Baldwin RM, Falls TJ, Bell JC, Cote J. Tudor domain containing protein 3 promotes tumorigenesis and invasive capacity of breast cancer cells. Sci Rep. 2017;7:5153.
Laisk-Podar T, Kaart T, Peters M, Salumets A. Genetic variants associated with female reproductive ageing–potential markers for assessing ovarian function and ovarian stimulation outcome. Reprod Biomed Online. 2015;31:199–209.
Cheng R, Qi L, Kong X, Wang Z, Fang Y, Wang J. Identification of the significant genes regulated by estrogen receptor in estrogen receptor-positive breast cancer and their expression pattern changes when tamoxifen or fulvestrant resistance occurs. Front Genet. 2020;11: 538734.
Zhuo L, Gong J, Yang R, Sheng Y, Zhou L, Kong X, et al. Inhibition of proliferation and differentiation and promotion of apoptosis by cyclin L2 in mouse embryonic carcinoma P19 cells. Biochem Bioph Res Co. 2009;390:451–7.
Pathak S, Stewart WCL, Burd CE, Hester ME, Greenberg DA. Brd2 haploinsufficiency extends lifespan and health span in C57B6/J mice. PLoS ONE. 2020;15:6.
Trousdale RK, Wolgemuth DJ. Bromodomain containing 2 (Brd2) is expressed in distinct patterns during ovarian folliculogenesis independent of FSH or GDF9 action. Mol Reprod Dev. 2004;68:261–8.
Luciani A, Schumann A, Berquez M, Chen Z, Nieri D, Failli M, et al. Impaired mitophagy links mitochondrial disease to epithelial stress in methylmalonyl-CoA mutase deficiency. Nat Commun. 2020;11:970.
Ma H, Fang C, Liu L, Wang Q, Aniwashi J, Sulaiman Y, et al. Identification of novel genes associated with litter size of indigenous sheep population in Xinjiang, China using specific-locus amplified fragment sequencing technology. PeerJ. 2019;7: e8079.
Liang MR, Zeng Y, Zeng SY, Zhang JW, Yang BC, Zhang ZY, et al. The expression of MBD6 is associated with tumor size in uterine leiomyomas. Genet Test Mol Biomark. 2019;23:523–32.
Liu Y, Zhou T, Sun LY, Wang HD, Zhou LT. The effect of Notch signal pathway on PM 2.5 -induced Muc5ac in Beas-2B cells. Ecotoxicol Environ Saf. 2020;203:110956.
Leong KG, Karsan A. Recent insights into the role of Notch signaling in tumorigenesis. Blood. 2006;107:2223–33.
Wu YH, Ko TP, Guo RT, Hu SM, Chuang LM, Wang AHJ. Structural basis for catalytic and inhibitory mechanisms of human prostaglandin reductase PTGR2. Structure. 2008;16:1714–23.
Chen IJ, Hee SW, Liao CH, Lin SY, Su L, Shun CT, et al. Targeting the 15-keto-PGE2-PTGR2 axis modulates systemic inflammation and survival in experimental sepsis. Free Radic Biol Med. 2018;115:113–26.
Espey LL. Ovulation as an inflammatory reaction-A hypothesis. Biol Reprod. 1980;22:73–106.
Hosseini SM, Okoye I, Chaleshtari MG, Hazhirkarzar B, Mohamadnejad J, Azizi G, et al. E2 ubiquitin-conjugating enzymes in cancer, implications for immunotherapeutic interventions. Clin Chim Acta. 2019;498:126–34.
Grøndahl C, Lessl M, Faerge I, Hegele-Hartung C, Wassermann K, Ottesen JL. Meiosis-activating sterol-mediated resumption of meiosis in mouse oocytes in vitro is influenced by protein synthesis inhibition and cholera toxin. Biol Reprod. 2000;62:775–80.
Shen BL, Zhang ZP, Wang YL, Wang GD, Chen Y, Lin P, et al. Differential expression of ubiquitin-conjugating enzyme E2r in the developing ovary and testis of penaeid shrimp Marsupenaeus japonicus. Mol Biol Rep. 2009;36:1149–57.
Bai DP, Chen Y, Hu YQ, He WF, Shi YZ, Fan QM, et al. Transcriptome analysis of genes related to gonad differentiation and development in Muscovy ducks. BMC Genomics. 2020;21:438.
Bachrach U, Ash I, Abu-Elheiga L, Hershkovitz M, Loyter A. Fusion-mediated microinjection of active amine and diamine oxidases into cultured cells, effect on protein and DNA synthesis in chick embryo fibroblasts and in glioma cells. J Cell Physiol. 1987;131:92–8.
Heniquez A, Meissonnier G, Visentin V, Prévot D, Carpéné C. High expression of semicarbazide-sensitive amine oxidase genes AOC2 and AOC3, but not the diamine oxidase gene AOC1 in human adipocytes. Inflamm Res. 2003;52(Suppl 1):S74–5.
Zhang Q, Mashima Y, Noda S, Imamura Y, Kudoh J, Shimizu N, et al. Characterization of AOC2 gene encoding a copper-binding amine oxidase expressed specifically in retina. Gene. 2003;318:45–53.
Aalto K, Autio A, Kiss EA, Elima K, Nymalm Y, Veres TZ, et al. Siglec-9 is a novel leukocyte ligand for vascular adhesion protein-1 and can be used in PET imaging of inflammation and cancer. Blood. 2011;118:3725–33.
Friedlander MR, Mackowiak SD, Li N, Chen W, Rajewsky N. miRDeep2 accurately identifies known and hundreds of novel microRNA genes in seven animal clades. Nucleic Acids Res. 2011;40:37–52.
Wen M, Shen Y, Shi S, Tang T. miREvo, an integrative microRNA evolutionary analysis platform for next-generation sequencing experiments. BMC Bioinformatics. 2012;13:140.
Wu HJ, Ma YK, Chen T, Wang M, Wang XJ. PsRobot, a web-based plant small RNA meta-analysis toolbox. Nucleic Acids Res. 2012;40:W22–8.
Enright AJ, John B, Gaul U, Tuschl T, Sander C, Marks DS. MicroRNA targets in Drosophila. Genome Biol. 2003;5:R1.
Zhou L, Chen J, Li Z, Li X, Hu X, Huang Y, et al. Integrated profiling of microRNAs and mRNAs, microRNAs located on Xq27.3 associate with clear cell renal cell carcinoma. PLoS One. 2010;5:e15224.
Storey JD. The positive false discovery rate, A Bayesian interpretation and the q-value. Ann Stat. 2003;31:2013–35.
Young MD, Wakefield MJ, Smyth GK, Oshlack A. goseq, Gene Ontology testing for RNA-seq datasets. Gene, 2012.
Kanehisa M, Araki M, Goto S, Hattori M, Hirakawa M, Itoh M, et al. KEGG for linking genomes to life and the environment. Nucleic Acids Res. 2008;36:480–4.
Kanehisa M, Goto S. KEGG: Kyoto Encyclopedia of Genes and Genomes. Nucleic Acids Res. 2000;28:27–30.
Kanehisa M. Toward understanding the origin and evolution of cellular organisms. Protein Sci. 2019;28:1947–51.
Kanehisa M, Furumichi M, Sato Y, Ishiguro-Watanabe M, Tanabe M. KEGG: integrating viruses and cellular organisms. Nucleic Acids Res. 2021;49:545–51.
Mao X, Cai T, Olyarchuk JG, Wei L. Automated genome annotation and pathway identification using the KEGG orthology (KO) as a controlled vocabulary. Bioinformatics. 2005;21:3787–93.
Livak KJ, Schmittgen TD. Analysis of Relative Gene Expression Data Using Real-Time Quantitative PCR and the 2−ΔΔCT Method. Methods. 2002;25(4):402–8.