Rönnegård L, Valdar W: Detecting major genetic loci controlling phenotypic variability in experimental crosses. Genetics. 2011, 188: 434-447.
Article
Google Scholar
Visscher PM, Posthuma D: Statistical power to detect genetic loci affecting environmental sensitivity. Behavior Genet. 2010, 40: 728-733. 10.1007/s10519-010-9362-0.
Article
Google Scholar
Paré G, Cook NR, Ridker PM, Chasman DI: On the use of variance per genotype as a tool to identify quantitative trait interaction effects: a report from the women’s genome health study. PLoS Genet. 2010, 6: e1000981-10.1371/journal.pgen.1000981.
Article
PubMed Central
PubMed
Google Scholar
Struchalin MV, Dehghan A, Witteman JC, Duijn CV, Aulchenko YS: Variance heterogeneity analysis for detection of potentially interacting genetic loci: method and its limitations. BMC Genet. 2010, 11: 92-
Article
PubMed Central
PubMed
Google Scholar
Fraser HB, Schadt EE: The quantitative genetics of phenotypic robustness. PLoS ONE. 2010, 5: e8635-10.1371/journal.pone.0008635.
Article
PubMed Central
PubMed
Google Scholar
Deng WQ, Paré G: A fast algorithm to optimize SNP prioritization for gene-gene and gene-environment interactions. Genet Epidemiol. 2011, 35: 729-738. 10.1002/gepi.20624.
Article
PubMed
Google Scholar
Struchalin MV, Amin N, Eilers PH, van Duijn CM, Aulchenko YS: An R package VariABEL for genome-wide searching of potentially interacting loci by testing genotypic variance heterogeneity. BMC Genet. 2012, 13: 4-
Article
PubMed Central
PubMed
Google Scholar
Yang Y, Christensen OF, Sorensen D: Use of genomic models to study genetic control of environmental variance. Genet Res. 2011, 93: 125-138. 10.1017/S0016672311000012.
Article
CAS
Google Scholar
Perry GML, Nehrke KW, Bushinsky Da, Reid R, Lewandowski KL, Hueber P, Scheinman SJ: Sex modifies genetic effects on residual variance in urinary calcium excretion in rat (Rattus norvegicus). Genetics. 2012, 191: 1003-1013. 10.1534/genetics.112.138909.
Article
PubMed Central
CAS
PubMed
Google Scholar
Shen X, Pettersson M, Rönnegård L, Carlborg O: Inheritance beyond plain heritability: variance controlling genes in Arabidopsis thaliana. PLoS Genet. 2012, (in press)
Google Scholar
Hill WG, Mulder HA: Genetic analysis of environmental variation. Genet Res. 2010, 92: 381-395. 10.1017/S0016672310000546.
Article
Google Scholar
Mackay TF, Lyman RF: Drosophila bristles and the nature of quantitative genetic variation. Philos Trans of the R Soc B. 2005, 360: 1513-1527. 10.1098/rstb.2005.1672.
Article
CAS
Google Scholar
Atwell S, Huang YS, Vilhjalmsson BJ, Willems G, Horton M, Li Y, Meng D, Platt A, Tarone AM, Hu TT, Jiang R, Muliyati NW, Zhang X, Amer MA, Baxter I, Brachi B, Chory J, Dean C, Debieu M, de Meaux J, Ecker JR, Faure N, Kniskern JM, Jones JDG, Michael T, Nemri A, Roux F, Salt DE, Tang C, Todesco M, Traw MB, Weigel D, Marjoram P, Borevitz JO, Bergelson J, Nordborg M: Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines. Nature. 2010, 465 (7298): 627-631. 10.1038/nature08800.
Article
PubMed Central
CAS
PubMed
Google Scholar
Tomatsu H, Takano J, Takahashi H, Watanabe-Takahashi A, Shibagaki N, Fujiwara T: An Arabidopsis thaliana high-affinity molybdate transporter required for efficient uptake of molybdate from soil. Proc of the National Acad of Sci U S A. 2007, 104 (47): 18807-18812. 10.1073/pnas.0706373104.
Article
CAS
Google Scholar
Baxter I, Muthukumar B, Park HC, Buchner P, Lahner B, Danku J, Zhao K, Lee J, Hawkesford MJ, Guerinot ML, Salt DE: Variation in molybdenum content across broadly distributed populations of Arabidopsis thaliana is controlled by a mitochondrial molybdenum transporter (MOT1). PLoS Genet. 2008, 4 (2): e1000004-10.1371/journal.pgen.1000004.
Article
PubMed Central
PubMed
Google Scholar
Conover W, Johnson M, Johnson M: A comparative study of tests for homogeneity of variances, with applications to the outer continental shelf bidding data. Technometrics. 1981, 23 (4): 351-361. 10.1080/00401706.1981.10487680.
Article
Google Scholar
Levene H: Robust tests for equality of variances. Contributions to Probability and Statistics. Edited by: Olkin I. 1960, Calif: Stanford University Press, Palo Alto, 278-292.
Google Scholar
Brown MB, Forsythe AB: Robust tests for equality of variances. J of the Am Stat Assoc. 1974, 69: 364-367. 10.1080/01621459.1974.10482955.
Article
Google Scholar
Gastwirth JL, Gel YR, Miao W: The impact of Levene’s test of equality of variances on statistical theory and practice. Stat Sci. 2009, 24: 343-360. 10.1214/09-STS301.
Article
Google Scholar
Sorensen D: Developments in statistical analysis in quantitative genetics. Genetica. 2009, 136: 319-332. 10.1007/s10709-008-9303-5.
Article
PubMed
Google Scholar
Smyth GK: Generalized linear models with varying dispersion. J of the R Stat Soc B. 1989, 51: 47-60.
Google Scholar
McCullagh P, Nelder JA: Generalized linear models. 1989, London: Chapman & Hall/CRC
Book
Google Scholar
Hoaglin DC, Welsch RE: The hat matrix in regression and ANOVA. The Am Stat. 1978, 32: 17-22.
Google Scholar
Haley CS, Knott SA, Elsen JM: Mapping quantitative trait loci in crosses between outbred lines using least squares. Genetics. 1994, 136: 1195-1207.
PubMed Central
CAS
PubMed
Google Scholar
Mott R, Talbot CJ, Turri MG, Collins AC, Flint J: A method for fine mapping quantitative trait loci in outbred animal stocks. Proc of the National Acad of Sci U S A. 2000, 97: 12649-12654. 10.1073/pnas.230304397.
Article
Google Scholar
Zheng J, Li Y, Abecasis GR, Scheet P: A comparison of approaches to account for uncertainty in analysis of imputed genotypes. Genetic Epidemiol. 2011, 35 (2): 102-110. 10.1002/gepi.20552.
Article
Google Scholar
Xu S: A comment on the simple regression method for interval mapping. Genetics. 1995, 141: 1657-1659.
PubMed Central
CAS
PubMed
Google Scholar
Xu S: Further investigation on the regression method of mapping quantitative trait loci. Heredity. 1998, 80: 364-373. 10.1046/j.1365-2540.1998.00307.x.
Article
PubMed
Google Scholar
Lee Y, Nelder JA: Hierarchical generalized linear models (with Discussion). J of the Royal Stat Soc B. 1996, 58: 619-678.
Google Scholar
Lee Y, Nelder JA, Pawitan Y: Generalized linear models with random effects - unified analysis via h-likelihood. 2006, London: Chapman & Hall/CRC
Book
Google Scholar
Rönnegård L, Shen X, Alam M: hglm: A package for fitting hierarchical generalized linear models. The R Journal. 2010, 2 (2): 20-28.
Google Scholar
Rönnegård L, Felleki M, Fikse F, Mulder HA, Strandberg E: Genetic heterogeneity of residual variance: estimation of variance components using double hierarchical generalized linear models. Genetics Sel Evol. 2010, 42: 8-10.1186/1297-9686-42-8.
Article
Google Scholar
Aulchenko YS, de Koning DJ, Haley C: Genomewide rapid association using mixed model and regression: a fast and simple method for genomewide pedigree-based quantitative trait loci association. Genetics. 2007, 177: 577-585. 10.1534/genetics.107.075614.
Article
PubMed Central
CAS
PubMed
Google Scholar
Valdar W, Holmes CC, Mott R, Flint J: Mapping in structured populations by resample model averaging. Genetics. 2009, 182: 1263-1277. 10.1534/genetics.109.100727.
Article
PubMed Central
PubMed
Google Scholar
Yang Y, Christensen OF, Sorensen D: Analysis of a genetically structured variance heterogeneity model using Box-Cox transformation. Genet Res. 2011, 93: 33-46. 10.1017/S0016672310000418.
Article
CAS
Google Scholar
Cheverud JM, Ehrich TH, Vaughn TT, Koreishi SF, Linsey RB, PLetscher LS: Pleiotropic effects on mandibular morphology II: differential epistasis and genetic variation in morphological integration. J of Exp Zool (Mol Dev Evol). 2004, 302: 424-435.
Article
Google Scholar
Leamy LJ, Pomp D, Lightfoot JT: Genetic variation in the pleiotropic association between physical activity and body weight in mice. Genetics Sel Evol. 2009, 41: 41-10.1186/1297-9686-41-41.
Article
Google Scholar
Pavlicev M, Cheverud JM, Wagner GP: Evolution of adaptive phenotypic variation patterns by direct selection for evolvability. Proc of the R Soc B. 2011, 278 (1713): 1903-1912. 10.1098/rspb.2010.2113.
Article
Google Scholar