Table 5 Marker-trait associations with P-value less than 0.01, QTLs detected, proportion of phenotypic variance explained (PVE), marker position on chromosome derived from 262 markers and 543 rice accessions
Trait | QTL | Chr | Marker linked with QTL | Position (cM) | P value | PVE (%) |
|---|---|---|---|---|---|---|
MEL/cm | qMel-1 | 1 | RM265 | 170 | 5.38E-08 | 9.1 |
qMel-2–1 | 2 | RM525 | 118.1 | 2.75E-04 | 10.2 | |
qMel-2–2 | 2 | RM1358 | 48.1 | 2.76E-03 | 6.1 | |
qMel-3 | 3 | RM16 | 84.5 | 5.20E-05 | 5.5 | |
qMel-7 | 7 | RM5380 | 67 | 1.21E-06 | 11.3 | |
qMel-8 | 8 | RM6948 | 114.4 | 1.18E-03 | 4.6 | |
qMel-10–1 | 10 | RM304 | 38.1 | 1.17E-04 | 5.7 | |
qMel-10–2 | 10 | RM311 | 46.4 | 6.74E-04 | 4.8 | |
qMel-10–3 | 10 | RM333 | 121.3 | 2.55E-03 | 4.0 | |
qMel-11 | 11 | RM224 | 117.4 | 5.92E-03 | 5.9 | |
qMel-12 | 12 | RM17 | 107.4 | 6.23E-04 | 9.6 |