Screening germplasm and detecting QTLs for mesocotyl elongation trait in rice (Oryza sativa L.) by association mapping

Table 2 Comparison of Dʹ values for pair-wise SSR loci in five subpopulations

Cluster	No. of LD	Ratio^b (%)	Frequency of D′ value (P < 0.05)					Means of D^c′
Cluster	locus pairs^a	Ratio^b (%)	Frequency of D′ value (P < 0.05)					Means of D^c′
			0–0.20	0.21–0.40	0.41–0.60	0.61–0.80	0.81–1.0
POP1	825	23.2	4	74	284	324	139	0.625
POP2	994	27.9	0	117	308	369	200	0.633
POP3	1128	31.7	2	110	302	434	280	0.66
POP4	32	0.9	0	0	8	14	10	0.718
POP5	583	1.6	7	104	181	118	173	0.628

^aLD means linkage disequilibrium
^bRatio between the number of intrachromosomal significant LD locus pairs and total number of significant LD locus pairs
^cDʹ means standardized disequilibrium coefficients

ISSN: 2730-6844