Table 1 TSS number and predictive score value for MAGE genes encoding for embryonic development in cattle
Gene Name/ ID | Corresponding promoter region name | No. of TSSs identified | Predictive score value | Distance of best TSSs from ATG |
|---|---|---|---|---|
LOC113887351 | Pro-MAGEH1 | 3 | 0.90,0.97,0.97 | -462 |
LOC113891273 | Pro-MAGEF1 | 2 | 0.81, 0.98 | -335 |
LOC113887359 | Pro-MAGEE2 | 1 | 0.90 | -910 |
LOC113879707 | Pro-MAGEL2 | 2 | 0.84, 1.00 | -495 |
LOC113879741 | Pro-NDN | 1 | 0.84 | -137 |
LOC113888173 | Pro-MAGE A10-like | 1 | 0.83 | -260 |
LOC113888161 | Pro-MAGE A1-like | 1 | 0.96 | -850 |
LOC113888158 | Pro-MAGE A9-like | 1 | 0.97 | -380 |
LOC113887980 | Pro-MAGE B17-like | 1 | 0.80 | -737 |
LOC113887988 | Pro-MAGE B10-like | 1 | 0.98 | -986 |
LOC113888015 | Pro-MAGE B16-like | 1 | 0.99 | -265 |
LOC113887630 | Pro-MAGE B1-like | 1 | 0.87 | -865 |
LOC113887648 | Pro-MAGE B2-like | 6 | 0.83,0.87,0.90,0.91,0.95,0.97 | -1782 |
LOC113887982 | Pro-MAGE B5-like | 1 | 0.96 | -1626 |
LOC113887965 | Pro-MAGE B4-like | 1 | 1.00 | -997 |
LOC113887799 | Pro-MAGE B18-like | 2 | 0.86, 0.94 | -851 |
LOC113887694 | Pro-MAGE B3-like | 1 | 0.84 | -387 |
LOC113887472 | Pro-MAGE D2-like | 2 | 0.87, 0.90 | -1545 |
LOC113886694 | Pro-MAGE A8-like | 1 | 0.99 | -907 |