Table 2 Top 15 differentially methylated CpG sites associated with preterm birth, InterGEN
CpG site | Gene Name | Chr | Position | Promoter Associated | FDR | P-value |
|---|---|---|---|---|---|---|
cg02083539 | DOC2A | 16 | 30,022,586 | NO | 0.51 | 2.08E-06 |
cg14696870 | FCER1A | 1 | 159,258,877 | NO | 0.51 | 3.00E-06 |
cg19365615 | NQO2 | 6 | 2,999,313 | YES | 0.51 | 3.67E-06 |
cg16492510 | 7 | 157,561,684 | NO | 0.68 | 6.29E-06 | |
cg06765321 | GMCL1 | 2 | 70,057,479 | YES | 0.75 | 1.05E-05 |
cg24049621 | ZNF532 | 18 | 56,528,679 | NO | 0.75 | 1.07E-05 |
cg13372811 | RP4-773 N10.6 | 1 | 110,627,590 | NO | 0.75 | 1.18E-05 |
cg08578323 | NDUFAF2 | 5 | 60,428,301 | NO | 0.77 | 1.36E-05 |
cg02437376 | VDAC2 | 10 | 76,969,880 | NO | 0.8 | 1.61E-05 |
cg25270236 | U2 | 10 | 27,482,721 | NO | 0.8 | 1.85E-05 |
cg15352013 | 16 | 49,497,733 | YES | 0.8 | 2.04E-05 | |
cg06473773 | SNORA71D | 20 | 37,063,729 | YES | 0.8 | 2.39E-05 |
cg01078147 | SEMA6A | 5 | 115,911,468 | NO | 0.8 | 2.49E-05 |
cg27478704 | TMEM63C | 14 | 77,662,756 | NO | 0.8 | 2.51E-05 |
cg07215395 | CDO1 | 5 | 115,148,221 | NO | 0.8 | 2.56E-05 |