Table 5 The summary of 8 key DMGs identified by the pairwise comparison
From: Genome-wide DNA methylation analysis in Chinese Chenghua and Yorkshire pigs
DMGs | SSC | Starta | Enda | DMR | Function |
|---|---|---|---|---|---|
ADCY1 | 18 | 50,046,575 | 50,143,771 | SSC18:50056501–50,057,000 | Related to pigmentation |
AGBL4 | 6 | 161,952,983 | 163,216,257 | SSC6:163155001–163,155,500 | Associated with skeletal formation |
EXOC2 | 7 | 195,081 | 341,454 | SSC7:251501–252,000 | Related to the tanning ability |
FUBP3 | 1 | 270,652,398 | 270,705,033 | SSC1:270700001–270,700,500 | Associated with loin eye area |
PAPPA2 | 9 | 118,364,592 | 118,635,969 | SSC9:118601501–118,602,000 | Plays an important role in regulation of IGF-I bioavailability |
PIK3R1 | 16 | 46,434,873 | 46,523,609 | SSC16:46495001–46,495,500 | Be essential for myogenic differentiation |
MGMT | 14 | 138,499,161 | 138,779,938 | SSC14:138646501–138,647,000 | Involved in a wide spectrum of human cancers |
MYH8 | 12 | 55,134,844 | 55,167,749 | SSC12:55148501–55,149,000 | Belonged to the myosin heavy chain gene family |