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Table 4 One gene identified by MR-mQTL analysis and achieved the nominal significance level in MR-eQTL analysis

From: Mapping methylation quantitative trait loci in cardiac tissues nominates risk loci and biological pathways in congenital heart disease

 

Exposure a

CHR

POSITION

Nearby Gene

Instrumental SNP b

POSITION

p.MR1c

MR-mQTL

cg02349334

13

76,363,851

LMO7

rs530855

76,337,780

3.92e-07

rs9318373

76,363,721

 

rs660942

76,373,924

 

kgp9606293

76,391,057

 

rs9600564

76,435,635

 

MR-eQTL

LMO7

13

76,194,570–76,434,006

LMO7

rs9318373

76,363,721

8.27e-03

  1. a MR-mQTL evaluated the causal effect of CpG site on CHD risk, while MR-eQTL evaluated the causal effect of gene expression on CHD risk
  2. b 5 mQTL SNPs and 1 eQTL SNP was avaiable for MR-mQTL and MR-eQTL, respectively
  3. c MR analysis in CHD GWAS Phase 1