Skip to main content

Table 2 QTLs correlated with plant height in five environments identified using SSR/InDel genotypes detected in a CSSL population

From: Identification and genetic analysis of qCL1.2, a novel allele of the “green revolution” gene SD1 from wild rice (Oryza rufipogon) that enhances plant height

Marker

Chr.

Environment

LOD

PVE(%)

Add

InDel1–16

1

E3

45.01

48.01

40.76

  

E1

40.12

44.02

48.66

  

E2

31.86

40.94

41.38

  

E5

3.263

4.830

12.95

RM125

7

E3

14.85

11.04

22.76

  

E5

13.67

10.97

28.28

RM427

7

E3

8.480

5.869

−20.83

  

E5

8.105

6.106

−26.49

RM5427

6

E5

4.071

8.665

0.6553

InDel4–3

4

E1

6.979

6.726

−22.43

InDel6–4

6

E2

6.886

10.60

−62.14

InDel1–12

1

E2

5.409

8.197

−38.72

RM190

6

E1

4.635

4.353

−21.99

RM128

1

E4

4.438

9.150

32.54

RM273

4

E1

4.265

3.988

24.25

RM533

7

E2

2.774

4.084

17.41

  1. PVE, the percentage of phenotypic variation explained; Add, the additive effect of the QTL
Back to article page

BMC Genomic Data

ISSN: 2730-6844

Contact us