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Table 1 Peak quantitative trait loci (QTLs) located in significant QTL regions by static allometry model. QTLs were assigned to one of four categories: Leaf Ontogenetic Allometry (LOA), and Leaf Static Allometry (LSA)

From: The genetic control of leaf allometry in the common bean, Phaseolus vulgaris

Time PointPeak QTL nameChromosome (Position)QTL region (cM)Left-right markerLeaf mass (uM = exp(uz))Leaf area (uA = exp(uy))
CCJJGenetic effectCCJJGenetic effect
Popayan
 Time 1LSA3.13 (32.5)32.5DiM_3–18 - DiM_3–190.063 ± 0.0020.052 ± 0.0020.01113.736 ± 0.59612.061 ± 0.4691.674
LSA3.33 (74.2)32.5–77.8Bng2160.063 ± 0.0020.050 ± 0.0020.01313.736 ± 0.52411.473 ± 0.5812.263
LSA9.19 (30.1)29.3–31.1DiM_9–220.063 ± 0.0020.050 ± 0.0020.01314.585 ± 0.58810.914 ± 0.4603.672
 Time 2LSA7.57 (38.6)29.5–56.0DiM_7–8 - DiM_7–90.196 ± 0.0050.151 ± 0.0040.04549.899 ± 1.39439.646 ± 1.03410.253
 Time 3LSA6.16 (49.2)44.2–54.4Bng183 - DiM_6–250.262 ± 0.0080.219 ± 0.0060.04364.072 ± 1.98251.935 ± 1.25112.136
LSA7.27 (35.9)19.3–48.0DiM_7–7 - DiM_7–80.267 ± 0.0070.206 ± 0.0050.06164.716 ± 1.75449.899 ± 1.30414.817
 Time 4LSA4.14 (62.7)60.6–63.8DiM_4–18 - DiM_4–190.262 ± 0.0090.223 ± 0.0070.03962.803 ± 2.10050.400 ± 1.73712.402
LSA7.27 (35.9)16.3–67.7DiM_7–7-DiM_7–80.284 ± 0.0070.208 ± 0.0070.07666.686 ± 1.67247.465 ± 1.66919.221
 Time 5LSA7.27 (35.9)17.3–52.0DiM_7–7-DiM_7–80.262 ± 0.0100.190 ± 0.0080.07259.146 ± 2.02742.948 ± 1.90016.197
Palmira
 Time 1LSA3.13 (32.5)32.5DiM_3–18 - DiM 3–190.096 ± 0.0140.081 ± 0.0150.01522.421 ± 2.58218.174 ± 2.6984.247
 Time 2LSA7.3 (LOA7.2)7 (36.6)16.3–56.0DiM_7–7 - DiM_7–80.32 ± 0.0020.244 ± 0.0020.07489.121 ± 0.6765.366 ± 0.61423.440
 Time 3LSA7.27 (35.9)11.4–56.0DiM_7–7 - DiM_7–80.454 ± 0.0070.326 ± 0.0060.128100.484 ± 1.73770.81 ± 1.83329.674
 Time 4LSA3.23 (33.8)32.5–39.8DiM_3–200.432 ± 0.0160.449 ± 0.009−0.01780.64 ± 2.97590.922 ± 1.933−10.281
LSA7.17 (33.5)10.4–56.0DiM_7–7 - DiM_7–80.522 ± 0.0110.372 ± 0.0090.150100.484 ± 2.61273.7 ± 2.0926.784
 Time 5LSA7.27 (35.9)14.3–60.9DiM_7–7 - DiM_7–80.497 ± 0.0180.368 ± 0.0140.12993.691 ± 3.11869.408 ± 2.74824.283
  1. The QTL information at each time point by static allometry model for Palmira (PAL) and Popayan (POP) in Colombia was shown. Maximum likelihood estimates (MLEs) of parameters uM and uA (the power transformations of uz and uy) and standard errors of the estimates for each QTL found to be different in the common bean (Phaseolus vulgaris) allometry relationship at two different sites, Palmira and Popayan. uM and uA are the genotypic values of leaf mass and leaf area for genotype CC and JJ. QTL region, the significant distribution range on chromosome. Peak QTL, the QTL located at the peak of the significant QTL region. Left-right marker, left marker and right marker on the both sides of peak QTL which located at the interval of two markers, particularly some peak QTLs located at a single marker