|
Sample
|
Amplicons (% of total amplicons)
|
Raw Reads
|
Clean Reads(% of raw reads)
|
Alignment to A + B(% of raw reads)
|
Unique aligned to A + B(% of raw reads)
|
|---|
|
GV
|
85(19.45%)
|
2,239,584
|
2,198,691(98.17%)
|
2,138,865(95.50%)
|
1,414,454(63.16%)
|
|
FL-113
|
64(14.65%)
|
1,968,429
|
1,936,715(98.39%)
|
1,886,187(95.82%)
|
1,175,212(59.70%)
|
|
1082/12 m
|
37(8.50%)
|
1,577,182
|
1,542,703(97.81%)
|
1,472,688(93.37%
|
894,211(56.70%)
|
|
1082/25 m
|
52(11.90%)
|
1,530,410
|
1,498,663(97.93%)
|
1,417,204(92.60%)
|
846,556(55.32%)
|
|
S Pool
|
53(12.13%)
|
1,651,158
|
1,601,860(97.01%)
|
1,507,515(91.3%)
|
949,213(57.49%)
|
|
1082/10 m
|
52(11.90%)
|
1,802,447
|
1,762,463(97.78%)
|
1,670,078(92.66%)
|
1,035,643(57.46%)
|
|
1075/1 m
|
44(10.07%)
|
1,766,476
|
1,749,951(99.06%)
|
1,661,645(94.07%)
|
1,030,698(58.35%)
|
|
1075/8 m
|
50(11.44%)
|
1,981,290
|
1,961,693(99.01%)
|
1,857,054(93.73%)
|
1,153,221(58.21%)
|
|
Total
|
437
|
14,516,976
|
14,252,739(98.18%)
|
13,611,236(93.76%)
|
8,513,628(58.65%)
|
- S Pool = Pool of DNAs from three phenotypically susceptible plants; A + B = A and B reference genome of Arachis duranensis and Arachis ipaensis from Bertioli et al., 2016
