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Table 2 Number and proportion of genome covered (Coverage %) by Gain, Loss and Complex Copy Number Variants Regions per chromosome (CHR)

From: Genomic variability in Mexican chicken population using copy number variants

CHR Gain (a) Loss (a) Complex (a) Total Coverage (%)
1 186 (3.94) 46 (0.38) 6 (0.29) 238 4.61
2 140 (4.78) 31 (0.38) 2 (0.14) 173 5.29
3 101 (3.02) 18 (0.11) 0 (0) 119 3.13
4 58 (3.40) 20 (0.36) 0 (0) 78 3.75
5 58 (6.43) 8 (0.15) 0 (0) 66 6.58
6 41 (3.61) 9 (0.15) 1 (0.15) 51 3.91
7 36 (4.03) 2 (0.02) 1 (0.46) 39 4.51
8 32 (4.55) 1 (0.30) 1 (0.68) 34 5.53
9 25 (3.22) 8 (0.23) 0 (0) 33 3.45
10 32 (5.06) 9 (0.79) 2 (1.11) 43 6.96
11 17 (2.64) 7 (0.78) 1 (0.19) 25 3.61
12 26 (2.73) 4 (0.16) 0 (0) 30 2.89
13 30 (3.88) 8 (1.05) 1 (0.52) 39 5.45
14 32 (7.72) 7 (2.05) 1 (0.20) 40 9.97
15 18 (1.90) 3 (0.12) 1 (0.31) 22 2.33
16 0 (0) 0 (0) 1 (81.60) 1 81.60
17 8 (2.28) 5 (0.97) 0 (0) 13 3.26
18 12 (3.54) 7 (2.06) 2 (5.03) 21 10.63
19 22 (8.32) 4 (0.23) 1 (0.91) 27 9.46
20 17 (3.57) 3 (0.26) 2 (0.39) 22 4.22
21 9 (1.60) 5 (0.30) 0 (0) 14 1.90
22 8 (4.31) 2 (0.74) 1 (0.62) 11 5.67
23 9 (4.78) 5 (0.95) 1 (0.73) 15 6.46
24 12 (9.91) 2 (0.24) 0 (0) 14 10.14
25 3 (2.41) 3 (1.13) 2 (2.39) 8 6.48
26 6 (2.27) 5 (2.11) 1 (1.46) 12 5.84
27 11 (6.04) 4 (3.66) 1 (10.74) 16 20.45
28 10 (3.36) 0 (0) 2 (2.24) 12 5.61
Total 959 226 31 1216  
  1. aCoverage of CNVR by chromosome and state (gain/loss/complex) relatively to each chromosome length
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