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Table 2 Genetic diversity parameters for the 19 E. oleifera populations

From: Genetic diversity of Elaeis oleifera (HBK) Cortes populations using cross species SSRs: implication’s for germplasm utilization and conservation

Country

Population Code

N

Na

Ne

I

Na (rar)

Ho

He

F

Colombia

C1

30

1.8 (0.261)

1.3 (0.131)

0.252 (0.094)

1.6816

0.119 (0.053)

0.150 (0.057)

0.242 (0.091)

 

C5

29

2.4 (0.498)

1.5 (0.199)

0.426 (0.138)

2.0689

0.204 (0.065)

0.239 (0.073)

0.078 (0.084)

 

C6

30

2.4 (0.414)

1.4 (0.126)

0.386 (0.109)

2.1300

0.218 (0.062)

0.219 (0.061)

-0.030 (0.045)

 

C8

30

2.4 (0.465)

1.5 (0.188)

0.420 (0.131)

2.1668

0.169 (0.053)

0.237 (0.073)

0.240 (0.060)

 

C9

29

2.4 (0.359)

1.4 (0.154)

0.401 (0.105)

2.1625

0.197 (0.056)

0.229 (0.060)

0.187 (0.104)

 

Mean

 

2.4 (0.180)

1.4 (0.071)

0.377 (0.051)

2.2004

0.181 (0.026)

0.215 (0.029)

0.141 (0.036)

Panama

P3

30

2.5 (0.327)

1.3 (0.084)

0.335 (0.078)

2.0213

0.128 (0.038)

0.188 (0.047)

0.227 (0.103)

 

P5

27

3.9 (0.501)

1.5 (0.173)

0.501 (0.111)

2.9892

0.117 (0.037)

0.250 (0.059)

0.527 (0.062)

 

P8

29

2.6 (0.341)

1.2 (0.064)

0.281 (0.075)

2.1863

0.062 (0.017)

0.137 (0.038)

0.289 (0.136)

 

P10

30

2.2 (0.434)

1.4 (0.171)

0.361 (0.126)

2.0774

0.139 (0.050)

0.198 (0.066)

0.254 (0.074)

 

P12

26

2.7 (0.438)

1.5 (0.186)

0.440 (0.127)

2.4031

0.169 (0.053)

0.239 (0.069)

0.190 (0.066)

 

P13

30

2.1 (0.385)

1.4 (0.141)

0.327 (0.112)

1.8635

0.095 (0.045)

0.189 (0.063)

0.388 (0.137)

 

Mean

 

2.7 (0.174)

1.4 (0.058)

0.374 (0.043)

2.4927

0.118 (0.017)

0.200 (0.024)

0.317 (0.041)

Costa Rica

K2

28

3.4 (0.35)

1.2 (0.07)

0.329 (0.052)

2.8601

0.056 (0.010)

0.151 (0.027)

0.587 (0.058)

 

K4

30

4.3 (0.304)

1.4 (0.108)

0.557 (0.083)

3.3201

0.126 (0.036)

0.268 (0.044)

0.565 (0.065)

 

K8

22

2.1 (0.345)

1.4 (0.137)

0.356 (0.111)

2.0403

0.130 (0.055)

0.199 (0.063)

0.479 (0.120)

 

K14

29

4.4 (0.374)

1.5 (0.092)

0.602 (0.074)

3.4944

0.206 (0.028)

0.293 (0.040)

0.259 (0.056)

 

K15

30

3.6 (0.355)

1.5 (0.150)

0.475 (0.098)

3.6962

0.150 (0.043)

0.248 (0.054)

0.477 (0.049)

 

K21

29

2.3 (0.496)

1.4 (0.152)

0.359 (0.117)

2.0293

0.116 (0.042)

0.221 (0.067)

0.459 (0.063)

 

Mean

 

3.3 (0.172)

1.4 (0.050)

0.449 (0.039)

3.0048

0.130 (0.016)

0.230 (0.022)

0.476 (0.030)

Honduras

H2

30

2.1 (0.327)

1.1 (0.042)

0.220 (0.051)

1.8588

0.053 (0.013)

0.112 (0.027)

0.375 (0.057)

 

H3

22

2.1 (0.339)

1.4 (0.112)

0.344 (0.077)

2.0827

0.068 (0.020)

0.194 (0.042)

0.510 (0.034)

 

Mean

 

2.1 (0.204)

1.2 (0.063)

0.282 (0.057)

2.0033

0.060 (0.015)

0.153 (0.032)

0.443 (0.068)

 

Overall mean

 

3.0(0.103)

1.4(0.031)

0.427(0.024)

2.502

0.141(0.010)

0.221(0.013)

0.365(0.020)

  1. N – number of samples in population; Na – number of different alleles; Ne– number of effective alleles; I = Shannon's Information Index, Na(rar) – allelic richness; Ho – observed heterozygosity; He – unbiased expected heterozygosity; F – fixation index
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BMC Genomic Data

ISSN: 2730-6844

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