Variants with respective alleles
|
Super-populations
|
Populations
|
Allele count (frequency)
|
Chi-square (p-value)
|
Genotype count (frequency)
|
Chi-square (p-value)
|
---|
| | |
1
|
2
| |
1/1
|
1/2
|
2/2
| |
---|
rs4824562 [A (1), G (2)]
|
AFR
|
ACB
|
140 (0.97)
|
5 (0.03)
|
27.80 (0.00)
|
46 (0.94)
|
3 (0.06)
|
0 (0.00)
|
16.30 (0.00)
|
| |
ASW
|
93 (0.97)
|
3 (0.03)
|
20.20 (0.00)
|
32 (0.91)
|
3 (0.09)
|
0 (0.00)
|
11.00 (0.00)
|
| |
ESN
|
144 (0.99)
|
1 (0.01)
|
38.10 (0.00)
|
45 (0.98)
|
1 (0.02)
|
0 (0.00)
|
20.30 (0.00)
|
| |
LWK
|
153 (0.99)
|
1 (0.01)
|
40.50 (0.00)
|
54 (0.98)
|
1 (0.02)
|
0 (0.00)
|
24.10 (0.00)
|
| |
MAG
|
170 (0.99)
|
1 (0.01)
|
44.80 (0.00)
|
57 (0.98)
|
1 (0.02)
|
0 (0.00)
|
25.40 (0.00)
|
| |
MSL
|
127 (0.99)
|
1 (0.01)
|
33.70 (0.00)
|
43 (1.00)
|
0 (0.00)
|
0 (0.00)
|
22.60 (0.00)
|
| |
YRI
|
163 (0.99)
|
1 (0.01)
|
43.00 (0.00)
|
56 (1.00)
|
0 (0.00)
|
0 (0.00)
|
28.50 (0.00)
|
|
AMR
|
CLM
|
110 (0.76)
|
35 (0.24)
|
0.01 (0.93)
|
25 (0.49)
|
22 (0.43)
|
4 (0.08)
|
1.00 (0.61)
|
| |
MXL
|
79 (0.82)
|
17 (0.18)
|
1.69 (0.19)
|
17 (0.53)
|
13 (0.41)
|
2 (0.06)
|
0.83 (0.66)
|
| |
PEL
|
85 (0.66)
|
44 (0.34)
|
3.31 (0.07)
|
16 (0.36)
|
25 (0.57)
|
3 (0.07)
|
3.96 (0.14)
|
| |
PUR
|
135 (0.88)
|
19 (0.12)
|
8.02 (0.01)
|
35 (0.70)
|
14 (0.28)
|
1 (0.02)
|
3.72 (0.16)
|
|
EAS
|
CDX
|
112 (0.79)
|
30 (0.21)
|
0.53 (0.47)
|
28 (0.57)
|
19 (0.39)
|
2 (0.04)
|
1.75 (0.42)
|
| |
CHB
|
134 (0.84)
|
26 (0.16)
|
3.54 (0.06)
|
39 (0.68)
|
14 (0.25)
|
4 (0.07)
|
1.28 (0.53)
|
| |
CHS
|
141 (0.89)
|
17 (0.11)
|
10.70 (0.00)
|
40 (0.75)
|
13 (0.25)
|
0 (0.00)
|
7.64 (0.02)
|
| |
JPT
|
130 (0.86)
|
22 (0.14)
|
5.21 (0.02)
|
33 (0.69)
|
14 (0.29)
|
1 (0.02)
|
3.41 (0.18)
|
| |
KHV
|
128 (0.84)
|
24 (0.16)
|
3.85 (0.05)
|
41 (0.77)
|
10 (0.19)
|
2 (0.04)
|
4.16 (0.13)
|
|
EUR
|
CEU
|
125 (0.84)
|
24 (0.16)
|
3.51 (0.06)
|
35 (0.70)
|
13 (0.26)
|
2 (0.04)
|
2.31 (0.31)
|
| |
FIN
|
131 (0.82)
|
29 (0.18)
|
2.06 (0.15)
|
41 (0.67)
|
18 (0.30)
|
2 (0.03)
|
2.70 (0.26)
|
| |
GBR
|
116 (0.85)
|
20 (0.15)
|
4.61 (0.03)
|
32 (0.71)
|
12 (0.27)
|
1 (0.02)
|
3.41 (0.18)
|
| |
IBS
|
142 (0.89)
|
18 (0.11)
|
9.96 (0.00)
|
39 (0.74)
|
13 (0.25)
|
1 (0.01)
|
4.51 (0.11)
|
| |
TSI
|
135 (0.84)
|
26 (0.16)
|
3.65 (0.06)
|
41 (0.76)
|
11 (0.20)
|
2 (0.04)
|
3.79 (0.15)
|
|
SAS
|
BEB
|
98 (0.75)
|
32 (0.25)
|
0.00 (0.99)
|
27 (0.62)
|
16 (0.36)
|
1 (0.02)
|
2.77 (0.25)
|
| |
GIH
|
110 (0.73)
|
40 (0.27)
|
0.19 (0.67)
|
29 (0.62)
|
13 (0.28)
|
5 (0.10)
|
0.22 (0.90)
|
| |
ITU
|
115 (0.79)
|
30 (0.21)
|
0.68 (0.41)
|
25 (0.58)
|
16 (0.37)
|
2 (0.05)
|
1.30 (0.52)
|
| |
PJL
|
116 (0.81)
|
28 (0.19)
|
1.20 (0.27)
|
29 (0.60)
|
18 (0.38)
|
1 (0.02)
|
3.14 (0.21)
|
| |
STU
|
119 (0.80)
|
30 (0.20)
|
0.91 (0.34)
|
29 (0.62)
|
14 (0.30)
|
4 (0.08)
|
0.32 (0.85)
|
| |
IND
|
132 (0.75)
|
43 (0.25)
|
-
|
14 (0.56)
|
8 (0.32)
|
3 (0.12)
|
-
|
rs56220155 [G (1), A (2)]
|
AFR
|
ACB
|
58 (0.40)
|
87 (0.60)
|
0.27 (0.60)
|
6 (0.12)
|
30 (0.61)
|
13 (0.27)
|
7.77 (0.02)
|
| |
ASW
|
37 (0.39)
|
59 (0.61)
|
0.05 (0.82)
|
2 (0.06)
|
18 (0.51)
|
15 (0.43)
|
3.99 (0.14)
|
| |
ESN
|
55 (0.38)
|
90 (0.62)
|
0.02 (0.89)
|
8 (0.17)
|
18 (0.39)
|
20 (0.44)
|
1.12 (0.57)
|
| |
LWK
|
59 (0.38)
|
95 (0.62)
|
0.05 (0.83)
|
11 (0.20)
|
23 (0.42)
|
21 (0.38)
|
2.27 (0.32)
|
| |
MAG
|
68 (0.40)
|
103 (0.60)
|
0.25 (0.62)
|
9 (0.16)
|
29 (0.50)
|
20 (0.34)
|
3.93 (0.14)
|
| |
MSL
|
61 (0.48)
|
67 (0.52)
|
3.36 (0.07)
|
8 (0.19)
|
27 (0.62)
|
8 (0.19)
|
10.70 (0.01)
|
| |
YRI
|
69 (0.42)
|
95 (0.58)
|
0.86 (0.35)
|
10 (0.17)
|
25 (0.45)
|
21 (0.38)
|
2.62 (0.27)
|
|
AMR
|
CLM
|
20 (0.14)
|
125 (0.86)
|
22.20 (0.00)
|
2 (0.04)
|
10 (0.20)
|
39 (0.76)
|
4.64 (0.10)
|
| |
MXL
|
10 (0.10)
|
86 (0.90)
|
22.10 (0.00)
|
1 (0.03)
|
3 (0.09)
|
28 (0.88)
|
7.32 (0.03)
|
| |
PEL
|
7 (0.05)
|
122 (0.95)
|
41.30 (0.00)
|
0 (0.00)
|
6 (0.14)
|
38 (0.86)
|
10.70 (0.01)
|
| |
PUR
|
53 (0.34)
|
101 (0.66)
|
0.27 (0.61)
|
7 (0.14)
|
24 (0.48)
|
19 (0.38)
|
2.89 (0.24)
|
|
EAS
|
CDX
|
16 (0.11)
|
126 (0.89)
|
27.60 (0.00)
|
1 (0.02)
|
7 (0.14)
|
41 (0.84)
|
8.13 (0.02)
|
| |
CHB
|
26 (0.16)
|
134 (0.84)
|
18.40 (0.00)
|
1 (0.02)
|
15 (0.26)
|
41 (0.72)
|
6.46 (0.04)
|
| |
CHS
|
23 (0.15)
|
135 (0.85)
|
21.80 (0.00)
|
0 (0.00)
|
17 (0.32)
|
36 (0.68)
|
8.95 (0.01)
|
| |
JPT
|
21 (0.14)
|
131 (0.86)
|
22.80 (0.00)
|
1 (0.02)
|
10 (0.21)
|
37 (0.77)
|
6.06 (0.05)
|
| |
KHV
|
15 (0.10)
|
137 (0.90)
|
32.70 (0.00)
|
1 (0.02)
|
10 (0.19)
|
42 (0.79)
|
7.21 (0.03)
|
|
EUR
|
CEU
|
35 (0.23)
|
114 (0.77)
|
7.03 (0.01)
|
3 (0.06)
|
16 (0.32)
|
31 (0.62)
|
1.97 (0.38)
|
| |
FIN
|
45 (0.28)
|
115 (0.72)
|
3.08 (0.08)
|
5 (0.08)
|
26 (0.43)
|
30 (0.49)
|
2.18 (0.34)
|
| |
GBR
|
45 (0.33)
|
91 (0.67)
|
0.55 (0.46)
|
4 (0.09)
|
23 (0.51)
|
18 (0.40)
|
3.61 (0.16)
|
| |
IBS
|
49 (0.31)
|
111 (0.69)
|
1.58 (0.21)
|
4 (0.08)
|
26 (0.49)
|
23 (0.43)
|
3.53 (0.17)
|
| |
TSI
|
44 (0.27)
|
117 (0.73)
|
3.68 (0.06)
|
6 (0.11)
|
19 (0.35)
|
29 (0.54)
|
0.61 (0.74)
|
|
SAS
|
BEB
|
33 (0.25)
|
97 (0.75)
|
4.73 (0.03)
|
1 (0.02)
|
22 (0.50)
|
21 (0.48)
|
6.20 (0.05)
|
| |
GIH
|
30 (0.20)
|
120 (0.80)
|
11.50 (0.00)
|
3 (0.06)
|
15 (0.32)
|
29 (0.62)
|
1.72 (0.42)
|
| |
ITU
|
54 (0.37)
|
91 (0.63)
|
0.00 (0.99)
|
7 (0.16)
|
17 (0.40)
|
19 (0.44)
|
1.05 (0.59)
|
| |
PJL
|
46 (0.32)
|
98 (0.68)
|
0.94 (0.33)
|
3 (0.06)
|
20 (0.42)
|
25 (0.52)
|
2.51 (0.29)
|
| |
STU
|
48 (0.32)
|
101 (0.68)
|
0.86 (0.35)
|
1 (0.02)
|
26 (0.55)
|
20 (0.43)
|
7.80 (0.02)
|
| |
IND
|
65 (0.37)
|
110 (0.63)
|
-
|
4 (0.16)
|
7 (0.28)
|
14 (0.56)
|
-
|
rs2283727 [C (1), A (2)]
|
AFR
|
ACB
|
132 (0.91)
|
13 (0.09)
|
14.20 (0.00)
|
40 (0.82)
|
9 (0.18)
|
0 (0.00)
|
7.63 (0.02)
|
| |
ASW
|
84 (0.88)
|
12 (0.12)
|
6.04 (0.01)
|
27 (0.77)
|
8 (0.23)
|
0 (0.00)
|
4.97 (0.08)
|
| |
ESN
|
124 (0.86)
|
21 (0.14)
|
5.57 (0.02)
|
35 (0.76)
|
10 (0.22)
|
1 (0.02)
|
3.64 (0.16)
|
| |
LWK
|
140 (0.91)
|
14 (0.09)
|
14.50 (0.00)
|
45 (0.82)
|
8 (0.15)
|
2 (0.03)
|
4.67 (0.10)
|
| |
MAG
|
155 (0.91)
|
16 (0.09)
|
15.00 (0.00)
|
50 (0.86)
|
7 (0.12)
|
1 (0.02)
|
7.99 (0.02)
|
| |
MSL
|
112 (0.88)
|
16 (0.12)
|
7.44 (0.01)
|
33 (0.77)
|
9 (0.21)
|
1 (0.02)
|
3.48 (0.18)
|
| |
YRI
|
143 (0.87)
|
21 (0.13)
|
8.32 (0.00)
|
47 (0.84)
|
8 (0.14)
|
1 (0.02)
|
6.70 (0.04)
|
|
AMR
|
CLM
|
145 (1.00)
|
0 (0.00)
|
42.30 (0.00)
|
51 (1.00)
|
0 (0.00)
|
0 (0.00)
|
23.50 (0.00)
|
| |
MXL
|
96 (1.00)
|
0 (0.00)
|
28.80 (0.00)
|
32 (1.00)
|
0 (0.00)
|
0 (0.00)
|
15.50 (0.00)
|
| |
PEL
|
127 (0.98)
|
2 (0.02)
|
32.20 (0.00)
|
42 (0.95)
|
2 (0.05)
|
0 (0.00)
|
14.40 (0.00)
|
| |
PUR
|
149 (0.97)
|
5 (0.03)
|
31.00 (0.00)
|
48 (0.96)
|
2 (0.04)
|
0 (0.00)
|
16.60 (0.00)
|
|
EAS
|
CDX
|
130 (0.91)
|
12 (0.09)
|
15.00 (0.00)
|
43 (0.88)
|
5 (0.10)
|
1 (0.02)
|
7.90 (0.02)
|
| |
CHB
|
141 (0.88)
|
19 (0.12)
|
9.64 (0.00)
|
43 (0.75)
|
13 (0.23)
|
1 (0.02)
|
4.52 (0.10)
|
| |
CHS
|
138 (0.87)
|
20 (0.13)
|
8.34 (0.00)
|
39 (0.74)
|
14 (0.26)
|
0 (0.00)
|
6.83 (0.03)
|
| |
JPT
|
131 (0.86)
|
21 (0.14)
|
6.55 (0.01)
|
37 (0.77)
|
10 (0.21)
|
1 (0.02)
|
3.99 (0.14)
|
| |
KHV
|
140 (0.92)
|
12 (0.08)
|
17.10 (0.00)
|
44 (0.83)
|
9 (0.17)
|
0 (0.00)
|
8.56 (0.01)
|
|
EUR
|
CEU
|
148 (0.99)
|
1 (0.01)
|
40.30 (0.00)
|
49 (0.98)
|
1 (0.02)
|
0 (0.00)
|
19.40 (0.00)
|
| |
FIN
|
160 (1.00)
|
0 (0.00)
|
46.30 (0.00)
|
61 (1.00)
|
0 (0.00)
|
0 (0.00)
|
27.60 (0.00)
|
| |
GBR
|
134 (0.99)
|
2 (0.01)
|
34.00 (0.00)
|
44 (0.98)
|
1 (0.02)
|
0 (0.00)
|
17.50 (0.00)
|
| |
IBS
|
160 (1.00)
|
0 (0.00)
|
46.30 (0.00)
|
53 (1.00)
|
0 (0.00)
|
0 (0.00)
|
24.30 (0.00)
|
| |
TSI
|
161 (1.00)
|
0 (0.00)
|
46.60 (0.00)
|
54 (1.00)
|
0 (0.00)
|
0 (0.00)
|
24.70 (0.00)
|
|
SAS
|
BEB
|
103 (0.79)
|
27 (0.21)
|
0.80 (0.37)
|
26 (0.59)
|
18 (0.41)
|
0 (0.00)
|
6.02 (0.05)
|
| |
GIH
|
127 (0.85)
|
23 (0.15)
|
4.75 (0.03)
|
32 (0.68)
|
12 (0.26)
|
3 (0.06)
|
0.82 (0.66)
|
| |
ITU
|
101 (0.70)
|
44 (0.30)
|
1.08 (0.30)
|
21 (0.49)
|
17 (0.40)
|
5 (0.11)
|
0.97 (0.62)
|
| |
PJL
|
109 (0.76)
|
35 (0.24)
|
0.03 (0.86)
|
31 (0.65)
|
14 (0.29)
|
3 (0.06)
|
0.72 (0.70)
|
| |
STU
|
119 (0.80)
|
30 (0.20)
|
1.15 (0.28)
|
30 (0.64)
|
17 (0.36)
|
0 (0.00)
|
6.01 (0.05)
|
| |
IND
|
131 (0.75)
|
44 (0.25)
|
-
|
15 (0.60)
|
7 (0.28)
|
3 (0.12)
|
-
|
rs3027441 [C (1), T (2)]
|
AFR
|
ACB
|
25 (0.17)
|
120 (0.83)
|
0.77 (0.38)
|
1 (0.02)
|
16 (0.33)
|
32 (0.65)
|
1.89 (0.39)
|
| |
ASW
|
18 (0.19)
|
78 (0.81)
|
0.22 (0.64)
|
0 (0.00)
|
13 (0.37)
|
22 (0.63)
|
3.65 (0.16)
|
| |
ESN
|
31 (0.21)
|
114 (0.79)
|
0.00 (0.96)
|
3 (0.06)
|
15 (0.33)
|
28 (0.61)
|
0.59 (0.75)
|
| |
LWK
|
16 (0.10)
|
138 (0.90)
|
7.01 (0.01)
|
2 (0.04)
|
10 (0.18)
|
43 (0.78)
|
1.18 (0.55)
|
| |
MAG
|
22 (0.13)
|
149 (0.87)
|
4.19 (0.04)
|
1 (0.02)
|
13 (0.22)
|
44 (0.76)
|
2.07 (0.36)
|
| |
MSL
|
21 (0.16)
|
107 (0.84)
|
1.07 (0.30)
|
1 (0.02)
|
12 (0.28)
|
30 (0.70)
|
1.25 (0.54)
|
| |
YRI
|
29 (0.18)
|
135 (0.82)
|
0.65 (0.42)
|
3 (0.05)
|
10 (0.18)
|
43 (0.77)
|
0.71 (0.70)
|
|
AMR
|
CLM
|
12 (0.08)
|
133 (0.92)
|
10.10 (0.00)
|
0 (0.00)
|
7 (0.14)
|
44 (0.86)
|
5.81 (0.06)
|
| |
MXL
|
7 (0.07)
|
89 (0.93)
|
8.75 (0.00)
|
0 (0.00)
|
3 (0.09)
|
29 (0.91)
|
5.35 (0.07)
|
| |
PEL
|
22 (0.17)
|
107 (0.83)
|
0.79 (0.37)
|
2 (0.04)
|
13 (0.30)
|
29 (0.66)
|
0.52 (0.77)
|
| |
PUR
|
11 (0.07)
|
143 (0.93)
|
12.9 (0.00)
|
0 (0.00)
|
5 (0.10)
|
45 (0.90)
|
7.20 (0.03)
|
|
EAS
|
CDX
|
17 (0.12)
|
125 (0.88)
|
4.67 (0.03)
|
1 (0.02)
|
9 (0.18)
|
39 (0.80)
|
2.00 (0.37)
|
| |
CHB
|
27 (0.17)
|
133 (0.83)
|
0.99 (0.32)
|
1 (0.02)
|
17 (0.30)
|
39 (0.68)
|
2.06 (0.36)
|
| |
CHS
|
32 (0.20)
|
126 (0.80)
|
0.04 (0.84)
|
1 (0.02)
|
19 (0.36)
|
33 (0.62)
|
2.48 (0.29)
|
| |
JPT
|
37 (0.24)
|
115 (0.76)
|
0.48 (0.50)
|
2 (0.04)
|
18 (0.38)
|
28 (0.58)
|
1.60 (0.45)
|
| |
KHV
|
16 (0.10)
|
136 (0.90)
|
6.75 (0.01)
|
1 (0.02)
|
9 (0.17)
|
43 (0.81)
|
2.47 (0.29)
|
|
EUR
|
CEU
|
1 (0.01)
|
148 (0.99)
|
32.60 (0.00)
|
0 (0.00)
|
1 (0.02)
|
49 (0.98)
|
14.30 (0.00)
|
| |
FIN
|
0 (0.00)
|
160 (1.00)
|
38.00 (0.00)
|
0 (0.00)
|
0 (0.00)
|
61 (1.00)
|
21.50 (0.00)
|
| |
GBR
|
2 (0.01)
|
134 (0.99)
|
27.00 (0.00)
|
0 (0.00)
|
1 (0.02)
|
44 (0.98)
|
12.90 (0.00)
|
| |
IBS
|
0 (0.00)
|
160 (1.00)
|
38.00 (0.00)
|
0 (0.00)
|
0 (0.00)
|
53 (1.00)
|
18.90 (0.00)
|
| |
TSI
|
0 (0.00)
|
161 (1.00)
|
38.30 (0.00)
|
0 (0.00)
|
0 (0.00)
|
54 (1.00)
|
19.20 (0.00)
|
|
SAS
|
BEB
|
27 (0.21)
|
103 (0.79)
|
0.01 (0.94)
|
0 (0.00)
|
18 (0.41)
|
26 (0.59)
|
5.03 (0.08)
|
| |
GIH
|
23 (0.15)
|
127 (0.85)
|
1.81 (0.18)
|
3 (0.06)
|
12 (0.26)
|
32 (0.68)
|
0.08 (0.96)
|
| |
ITU
|
44 (0.30)
|
101 (0.70)
|
3.55 (0.06)
|
5 (0.11)
|
17 (0.40)
|
21 (0.49)
|
2.37 (0.31)
|
| |
PJL
|
35 (0.24)
|
109 (0.76)
|
0.45 (0.50)
|
3 (0.06)
|
14 (0.29)
|
31 (0.65)
|
0.26 (0.88)
|
| |
STU
|
30 (0.20)
|
119 (0.80)
|
0.05 (0.82)
|
0 (0.00)
|
17 (0.36)
|
30 (0.64)
|
4.56 (0.10)
|
| |
IND
|
37 (0.21)
|
138 (0.79)
|
-
|
2 (0.08)
|
6 (0.24)
|
17 (0.68)
|
-
|
rs6324 [C (1), T (2)]
|
AFR
|
ACB
|
141 (0.97)
|
4 (0.03)
|
24.00 (0.00)
|
46 (0.94)
|
3 (0.06)
|
0 (0.00)
|
9.57 (0.01)
|
| |
ASW
|
92 (0.96)
|
4 (0.04)
|
13.90 (0.00)
|
32 (0.91)
|
3 (0.09)
|
0 (0.00)
|
6.09 (0.05)
|
| |
ESN
|
135 (0.93)
|
10 (0.07)
|
12.80 (0.00)
|
42 (0.91)
|
3 (0.07)
|
1 (0.02)
|
6.26 (0.04)
|
| |
LWK
|
149 (0.97)
|
5 (0.03)
|
23.60 (0.00)
|
51 (0.93)
|
3 (0.05)
|
1 (0.02)
|
8.24 (0.02)
|
| |
MAG
|
165 (0.96)
|
6 (0.04)
|
24.70 (0.00)
|
54 (0.93)
|
4 (0.07)
|
0 (0.00)
|
10.20 (0.01)
|
| |
MSL
|
123 (0.96)
|
5 (0.04)
|
18.40 (0.00)
|
38 (0.88)
|
5 (0.12)
|
0 (0.00)
|
5.75 (0.06)
|
| |
YRI
|
155 (0.95)
|
9 (0.05)
|
17.70 (0.00)
|
52 (0.93)
|
3 (0.05)
|
1 (0.02)
|
8.46 (0.02)
|
|
AMR
|
CLM
|
134 (0.92)
|
11 (0.08)
|
11.40 (0.00)
|
45 (0.88)
|
6 (0.12)
|
0 (0.00)
|
6.51 (0.04)
|
| |
MXL
|
89 (0.93)
|
7 (0.07)
|
8.75 (0.00)
|
29 (0.91)
|
3 (0.09)
|
0 (0.00)
|
5.35 (0.07)
|
| |
PEL
|
108 (0.84)
|
21 (0.16)
|
1.14 (0.29)
|
30 (0.68)
|
12 (0.27)
|
2 (0.05)
|
0.39 (0.82)
|
| |
PUR
|
146 (0.95)
|
8 (0.05)
|
17.60 (0.00)
|
46 (0.92)
|
4 (0.08)
|
0 (0.00)
|
8.34 (0.02)
|
|
EAS
|
CDX
|
125 (0.88)
|
17 (0.12)
|
4.67 (0.03)
|
39 (0.80)
|
9 (0.18)
|
1 (0.02)
|
2.00 (0.37)
|
| |
CHB
|
133 (0.83)
|
27 (0.17)
|
0.99 (0.32)
|
39 (0.68)
|
17 (0.30)
|
1 (0.02)
|
2.06 (0.36)
|
| |
CHS
|
126 (0.80)
|
32 (0.20)
|
0.04 (0.84)
|
33 (0.62)
|
19 (0.36)
|
1 (0.02)
|
2.48 (0.29)
|
| |
JPT
|
115 (0.76)
|
37 (0.24)
|
0.48 (0.49)
|
28 (0.58)
|
18 (0.38)
|
2 (0.04)
|
1.60 (0.45)
|
| |
KHV
|
136 (0.90)
|
16 (0.10)
|
6.75 (0.01)
|
43 (0.81)
|
9 (0.17)
|
1 (0.02)
|
2.47 (0.29)
|
|
EUR
|
CEU
|
148 (0.99)
|
1 (0.01)
|
32.60 (0.00)
|
49 (0.98)
|
1 (0.02)
|
0 (0.00)
|
14.30 (0.00)
|
| |
FIN
|
160 (1.00)
|
0 (0.00)
|
38.00 (0.00)
|
61 (1.00)
|
0 (0.00)
|
0 (0.00)
|
21.50 (0.00)
|
| |
GBR
|
134 (0.99)
|
2 (0.01)
|
27.00 (0.00)
|
44 (0.98)
|
1 (0.02)
|
0 (0.00)
|
12.90 (0.00)
|
| |
IBS
|
160 (1.00)
|
0 (0.00)
|
38.00 (0.00)
|
53 (1.00)
|
0 (0.00)
|
0 (0.00)
|
18.90 (0.00)
|
| |
TSI
|
161 (1.00)
|
0 (0.00)
|
38.30 (0.00)
|
54 (1.00)
|
0 (0.00)
|
0 (0.00)
|
19.20 (0.00)
|
|
SAS
|
BEB
|
103 (0.79)
|
27 (0.21)
|
0.01 (0.94)
|
26 (0.59)
|
18 (0.41)
|
0 (0.00)
|
5.03 (0.08)
|
| |
GIH
|
127 (0.85)
|
23 (0.15)
|
1.81 (0.18)
|
32 (0.68)
|
12 (0.26)
|
3 (0.06)
|
0.08 (0.96)
|
| |
ITU
|
101 (0.70)
|
44 (0.30)
|
3.55 (0.06)
|
21 (0.49)
|
17 (0.40)
|
5 (0.11)
|
2.37 (0.31)
|
| |
PJL
|
109 (0.76)
|
35 (0.24)
|
0.45 (0.50)
|
31 (0.65)
|
14 (0.29)
|
3 (0.06)
|
0.26 (0.88)
|
| |
STU
|
119 (0.80)
|
30 (0.20)
|
0.05 (0.82)
|
30 (0.64)
|
17 (0.36)
|
0 (0.00)
|
4.56 (0.10)
|
| |
IND
|
138 (0.79)
|
37 (0.21)
|
-
|
17 (0.68)
|
6 (0.24)
|
2 (0.08)
|
-
|
rs3027440 [T (1), C (2)]
|
AFR
|
ACB
|
141 (0.97)
|
4 (0.03)
|
34.40 (0.00)
|
46 (0.94)
|
3 (0.06)
|
0 (0.00)
|
7.79 (0.02)
|
| |
ASW
|
92 (0.96)
|
4 (0.04)
|
20.90 (0.00)
|
32 (0.91)
|
3 (0.09)
|
0 (0.00)
|
4.89 (0.09)
|
| |
ESN
|
135 (0.93)
|
10 (0.07)
|
21.60 (0.00)
|
42 (0.91)
|
3 (0.07)
|
1 (0.02)
|
4.63 (0.10)
|
| |
LWK
|
149 (0.97)
|
5 (0.03)
|
34.30 (0.00)
|
51 (0.93)
|
3 (0.05)
|
1 (0.02)
|
6.24 (0.04)
|
| |
MAG
|
165 (0.97)
|
6 (0.03)
|
36.30 (0.00)
|
54 (0.93)
|
4 (0.07)
|
0 (0.00)
|
8.30 (0.02)
|
| |
MSL
|
123 (0.96)
|
5 (0.04)
|
27.40 (0.00)
|
38 (0.88)
|
5 (0.12)
|
0 (0.00)
|
4.71 (0.10)
|
| |
YRI
|
155 (0.95)
|
9 (0.05)
|
28.00 (0.00)
|
52 (0.93)
|
3 (0.05)
|
1 (0.02)
|
6.42 (0.04)
|
|
AMR
|
CLM
|
134 (0.92)
|
11 (0.08)
|
19.80 (0.00)
|
45 (0.88)
|
6 (0.12)
|
0 (0.00)
|
5.40 (0.07)
|
| |
MXL
|
89 (0.93)
|
7 (0.07)
|
14.90 (0.00)
|
29 (0.91)
|
3 (0.09)
|
0 (0.00)
|
4.28 (0.12)
|
| |
PEL
|
108 (0.84)
|
21 (0.16)
|
4.79 (0.03)
|
30 (0.68)
|
12 (0.27)
|
2 (0.05)
|
0.70 (0.70)
|
| |
PUR
|
146 (0.95)
|
8 (0.05)
|
27.60 (0.00)
|
46 (0.92)
|
4 (0.08)
|
0 (0.00)
|
6.78 (0.03)
|
|
EAS
|
CDX
|
125 (0.88)
|
17 (0.12)
|
10.80 (0.00)
|
39 (0.80)
|
9 (0.18)
|
1 (0.02)
|
1.60 (0.45)
|
| |
CHB
|
133 (0.83)
|
27 (0.17)
|
4.84 (0.03)
|
39 (0.68)
|
17 (0.30)
|
1 (0.02)
|
2.51 (0.29)
|
| |
CHS
|
126 (0.80)
|
32 (0.20)
|
2.00 (0.16)
|
33 (0.62)
|
19 (0.36)
|
1 (0.02)
|
3.28 (0.19)
|
| |
JPT
|
115 (0.76)
|
37 (0.24)
|
0.27 (0.60)
|
28 (0.58)
|
18 (0.38)
|
2 (0.04)
|
2.53 (0.28)
|
| |
KHV
|
136 (0.90)
|
16 (0.10)
|
13.9 (0.00)
|
43 (0.81)
|
9 (0.17)
|
1 (0.02)
|
1.92 (0.38)
|
|
EUR
|
CEU
|
148 (0.99)
|
1 (0.01)
|
43.70 (0.00)
|
49 (0.98)
|
1 (0.02)
|
0 (0.00)
|
12.00 (0.00)
|
| |
FIN
|
160 (1.00)
|
0 (0.00)
|
50.00 (0.00)
|
61 (1.00)
|
0 (0.00)
|
0 (0.00)
|
18.60 (0.00)
|
| |
GBR
|
134 (0.98)
|
2 (0.02)
|
37.20 (0.00)
|
44 (0.98)
|
1 (0.02)
|
0 (0.00)
|
10.70 (0.01)
|
| |
IBS
|
160 (1.00)
|
0 (0.00)
|
50.00 (0.00)
|
53 (1.00)
|
0 (0.00)
|
0 (0.00)
|
16.30 (0.00)
|
| |
TSI
|
161 (1.00)
|
0 (0.00)
|
50.30 (0.00)
|
54 (1.00)
|
0 (0.00)
|
0 (0.00)
|
16.60 (0.00)
|
|
SAS
|
BEB
|
103 (0.79)
|
27 (0.21)
|
1.50 (0.22)
|
26 (0.59)
|
18 (0.41)
|
0 (0.00)
|
6.03 (0.05)
|
| |
GIH
|
127 (0.85)
|
23 (0.15)
|
6.35 (0.01)
|
32 (0.68)
|
12 (0.26)
|
3 (0.06)
|
0.31 (0.86)
|
| |
ITU
|
101 (0.70)
|
44 (0.30)
|
0.47 (0.49)
|
21 (0.49)
|
17 (0.40)
|
5 (0.11)
|
3.55 (0.17)
|
| |
PJL
|
109 (0.76)
|
35 (0.24)
|
0.27 (0.60)
|
31 (0.65)
|
14 (0.29)
|
3 (0.06)
|
0.74 (0.69)
|
| |
STU
|
119 (0.80)
|
30 (0.20)
|
2.01 (0.16)
|
30 (0.64)
|
17 (0.36)
|
0 (0.00)
|
5.32 (0.07)
|
| |
IND
|
128 (0.73)
|
47 (0.27)
|
-
|
18 (0.72)
|
5 (0.20)
|
2 (0.08)
|
-
|
-
AFR African, ACB African Caribbeans in Barbados, ASW Americans of African Ancestry in SW USA, ESN Esan in Nigeria, LWK Luhya in Webuye, Kenya, MAG Mandinka in The Gambia, MSL Mende in Sierra Leone, YRI Yoruba in Ibadan, Nigeria, AMR American, CLM, Colombians from Medellin, Colombia, MXL Mexican Ancestry from Los Angeles USA, PEL Peruvians from Lima, Peru, PUR Puerto Ricans from Puerto Rico, EAS East Asian, CDX Chinese Dai in Xishuangbanna, China, CHB Han Chinese in Bejing, China, CHS Southern Han Chinese, JPT Japanese in Tokyo, Japan, KHW Kinh in Ho Chi Minh City, Vietnam, EUR European, CEU Utah Residents (CEPH) with Northern and Western European Ancestry, FIN Finnish in Finland, GBR British in England and Scotland, IBS Iberian Population in Spain, TSI Toscani in Italia, SAS South Asian, BEB Bengali from Bangladesh, GIH Gujarati Indian from Houston, Texas, ITU Indian Telugu from the UK, PJL Punjabi from Lahore, Pakistan, STU Sri Lankan Tamil from the UK, IND Indo-Caucasoid control population. Significant differences are presented in bold