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Table 5 Average r 2 ± SD and mean of length distances between adjacent markers in chromosomes

From: Linkage disequilibrium, persistence of phase and effective population size estimates in Hereford and Braford cattle

Chra Length (Mb) Hereford Braford
n SNPb Average r 2 n SNP Average r 2
1 161.02 2697 0.24 ± 0.29 2699 0.17 ± 0.23
2 137.63 2197 0.23 ± 0.29 2200 0.18 ± 0.23
3 125.67 2000 0.21 ± 0.27 2001 0.17 ± 0.22
4 120.64 1987 0.23 ± 0.28 1988 0.16 ± 0.21
5 124.68 1732 0.20 ± 0.26 1734 0.16 ± 0.22
6 119.22 2066 0.26 ± 0.30 2069 0.20 ± 0.24
7 112.63 1824 0.25 ± 0.29 1824 0.19 ± 0.24
8 116.03 1958 0.23 ± 0.29 1959 0.18 ± 0.23
9 105.59 1670 0.23 ± 0.29 1671 0.17 ± 0.23
10 104.22 1760 0.21 ± 0.27 1761 0.16 ± 0.22
11 107.25 1805 0.20 ± 0.26 1806 0.16 ± 0.22
12 91.06 1342 0.21 ± 0.27 1344 0.15 ± 0.20
13 84.18 1449 0.19 ± 0.26 1449 0.15 ± 0.20
14 84.59 1471 0.23 ± 0.28 1471 0.18 ± 0.23
15 85.26 1374 0.19 ± 0.25 1374 0.15 ± 0.20
16 81.32 1314 0.21 ± 0.27 1314 0.16 ± 0.22
17 75.00 1249 0.20 ± 0.27 1250 0.15 ± 0.21
18 65.98 1036 0.21 ± 0.27 1038 0.16 ± 0.21
19 64.01 1058 0.17 ± 0.23 1059 0.14 ± 0.20
20 72.20 1264 0.19 ± 0.25 1264 0.15 ± 0.21
21 71.08 1124 0.20 ± 0.26 1124 0.16 ± 0.22
22 61.38 1021 0.20 ± 0.27 1025 0.15 ± 0.21
23 52.29 838 0.16 ± 0.23 838 0.13 ± 0.19
24 63.40 1014 0.21 ± 0.27 1018 0.16 ± 0.21
25 42.77 753 0.19 ± 0.25 755 0.15 ± 0.21
26 51.64 867 0.20 ± 0.27 867 0.14 ± 0.21
27 45.37 763 0.17 ± 0.24 764 0.14 ± 0.20
28 46.22 747 0.19 ± 0.24 747 0.13 ± 0.18
29 51.48 827 0.18 ± 0.25 828 0.13 ± 0.19
  1. aChromosomes
  2. bNumber of SNP
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