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Table 1 Promising chromosome regions for pH and colour detected by Bayes B analysis

From: Genome-wide association studies (GWAS) identify a QTL close to PRKAG3 affecting meat pH and colour in crossbred commercial pigs

Traits

Regions (SSC and position (Mb))

1 st SNP

Last SNP

No. of SNPs

% Genetic var. #

QFCOL b*

15_133

ASGA0070560

ASGA0070646

26

17.06

9_147

MARC0054470

H3GA0028692

30

1.36

QFCOL a*

15_133

ASGA0070560

ASGA0070646

26

8.68

5_107

MARC0078506

H3GA0017340

25

4.44

1_35

H3GA0001359

MARC0036030

25

1.25

TMCOL b*

15_133

ASGA0070560

ASGA0070646

26

12.91

16_73

ASGA0073971

M1GA0021138

25

1.25

X_1

ASGA0083984

ALGA0098972

19

1.00

FpH24

15_133

ASGA0070560

ASGA0070646

26

9.26

TMpH

15_133

ASGA0070560

ASGA0070646

26

3.51

  1. #percentage of the genetic variance explained by each region.
  2. *indicates the traits of Minolta colour a* and Minolta colour b*, which are the standard description for these traits (a*, b*).
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BMC Genomic Data

ISSN: 2730-6844

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