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Table 1 Occurrence of different SSR motifs in Arabidopsis and 9 Poacead species

From: Genome-wide distribution comparative and composition analysis of the SSRs in Poaceae

Species Arabidopsis Indica Bamboo Bread wheat Maize Millet Japonica Sorghum Wheat D Wheat A Percentage
Motif
Monomer 13,678 18,689 33,840 7,987 30,918 11,288 16,456 14,292 49,289 44,524 1.94%
Dimer 9,389 37,542 112,470 9,430 65,250 12,420 37,447 38,202 128,784 154,577 4.89%
Trimer 17,509 83,231 130,017 36,997 186,749 44,075 82,572 80,378 263,191 272,427 9.66%
Tetramer 11,196 51,793 150,923 32,191 122,672 33,871 49,725 78,057 198,272 216,215 7.63%
Pentamer 3,825 16,953 45,839 7,970 38,654 9,245 17,120 16,652 43,472 45,621 1.98%
Hexamer 87,737 321,203 102,4250 182,645 138,5114 251,640 302,713 492,967 154,1607 1,698,582 58.82%
Heptamer 27,342 91,677 292,745 47,776 305,914 69,959 87,499 142,410 392,833 411,405 15.09%
All 170,676 621,088 1,790,084 324,996 2,135,271 432,498 593,532 862,958 2,617,448 2,843,351 100.00%
Size(MB) 117.01 490.02 1,996.8 262.57 2,007.04 387.96 368.27 714.44 3,256.32 3,686.4  
No. of SSRs/Mb 1,458.6 1,267.5 896.5 1,237.7 1,063.9 1,114.8 1,611.7 1,207.9 803.8 771.3