From: First description of the complete human xylosyltransferase-I promoter region
Application |  | Primer sequence ( 5′ → 3 ′) | T A[°C] |
---|---|---|---|
PCR and sequencing | Fragment A | CCCTGTTTCGCGGCCCCTG | Slowdown-PCR |
CCGGAGTCGAGGCTGCTGAA | |||
 | Fragment B1 | ATGGATGGGGAAAAGGACAC | 58.8 |
TGGGGGAGGAGCCGAGGGAG | |||
 | Fragment B2 | CAGTCAGGATGGGAAAGAAC | 58.8 |
GGTGCCAACGATGTACTAAG | |||
 | Fragment C | AACAATCTCTTCCCACTCCC | 61.2 |
GGAGTTACTCAACCTTCGCA | |||
 | Fragment D | CATGCCCGGCTAATTTTTGT | 61.2 |
CTTCGCATCTTGTCTGCTGT | |||
 | Fragment XYLT1 238* | ACAGGGGTGTGGGGAGGGGGCGCCGCGCGGGCCAGGCGCC | 58.8 |
GCTCGGGCCGCCGCCGCCGCCGCCGCCTCGGCTCGCCGCT | |||
Plasmid sequencing | Â | CTAGCAAAATAGGCTGTCCC | Â |
 |  | CTTAATGTTTTTGGCATCTTCCA |  |
SDM | c.-403C>T | TCCCCCCGGCGCCTTCCCCATTACCCTCCCCTCCAGCGGGGA | Â |
 |  | TCCCCGCTGGAGGGGAGGGTAATGGGGAAGGCGCCGGGGGGA |  |
 | c.-1088C>A | GCTGGGAGGCTGCGGGGCCAGACTTTGGGGCTTGCATCCTGC |  |
 |  | GCAGGATGCAAGCCCCAAAGTCTGGCCCCGCAGCCTCCCAGC |  |