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Table 3 Single nucleotide polymorphisms (SNPs) in the exonic (in bold letters), intronic and 3' regions of bovine neuropeptide Y (NPY) gene.

From: Mapping of the transcription start site (TSS) and identification of SNPs in the bovine neuropeptide Y (NPY) gene

NCBI dbSNP Accession ss# Locus SNP Bos taurus (n = 34) B. indicus (n = 6)
    Major allele frequency Heterozygous Major allele frequency Heterozygous
107795833 197 C/G - - 0.83 0
107795834 218 G/C 0.91 0 0.83 0
107795835 228 C/T 0.99 1 0.67 4
107795836 305 C/G 0.93 3 0.92 1
107795837 358 G/A 0.99 1 0.75 3
107795838 361 A/C 0.93 3 0.92 1
107795839 380 G/A - - 0.67 4
107795840 592 C/A 0.99 1 0.67 2
107795841 642 G/A 0.93 3 0.88 1
107795842 762 T/C 0.96 1 0.92 1
107795843 820 G/A 0.97 0 - -
107795844 1004 C/+ - - 0.83 0
107795845 1014 C/T 0.97 2 0.83 0
107795846 1100 C/T 0.99 1 - -
107795847 1106 C/G - - 0.90 1
107795848 1312 A/C 0.75 9 - -
107795849 1321 A/G 0.87 5 - -
107795850 1420 C/A - - 0.90 1
107795851 1541 G/A - - 0.80 2
107795852 1694 A/G 0.57 11 - -
107795853 1713 G/T 0.85 4 - -
107795854 1757 G/A - - 0.80 2
107795855 1865 T/C 0.93 3 - -
107795856 2175 C/T 0.91 4 -  
107795857 2551 A/- - - - -
107795858 2892 G/A 0.70 14 - -
107795859 3883 A/- - - - -
107795860 4018 G/A 0.97 0 - -
107795861 4042 G/A - - 0.80 2
107795862 4066 T/C 0.75 9 - -
107795863 4953 G/A 0.96 3 - -
107795864 5213 C/G 0.96 3 - -
107795865 5273 A/G 0.96 3 - -
107795866 5280 T/A 0.96 3 - -
107795867 5642 C/T 0.95 3 0.75 1
107795868 5930 A/G - - 0.83 2
107795869 6341 G/A - - 0.50 4
107795870 6368 T/G 0.95 3 0.75 1
107795871 6385 A/G 0.95 3 0.75 1
107795872 6400 C/T 0.95 3 0.75 1
107795873 6526 A/T 0.98 1 - -
107795874 6527 G/A 0.95 3 - -
107795875 6658 A/C 0.91 4 0.83 2
107795876 6751 T/G 0.99 1 -  
107795877 6887 A/T - - 0.83 2
107795878 7192 C/T 0.50 16 - -
107795879 7211 A/T 0.91 4 - -
107795880 7552 T/- 0.88 0 0.80 0
107795881 7553 C/- 0.88 0 0.80 0
107795882 7641 T/G 0.88 2 - -