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Table 3 Results of BLAST Query – SDM fungal microsatellites showing homology against the NCBI database

From: Simple sequence repeat markers useful for sorghum downy mildew (Peronosclerospora sorghi) and related species

SSR loci Locus, Species, & Most related sequence (Genomic DNA/EST) Query coverage (%) Identity (%) E-value*
DM21 DQ645744, Phytophthora ramorum (Sudden oak death agent – Fungi), transposon GypsyPr-2 reverse transcriptase gene – Genomic DNA 26 96 3e–20
DM28 AF312890, Phytophthora cinnamomi SSR sequence – Genomic DNA 45 90 4e–36
DM53 DQ645744.1 – Phytopthora ramorum transposon GypsyPr-2 reverse transcriptase gene 96 78 4e–70
  AY830104, (GypsyPi-3a), AY830105 (GypsyPi-3b) Phytophthora infestans – retrotransposon 93 96 3e–14
  AF490339, Phytophthora infestans – Gypsy like retrotransposon, 87 90 2e–09
  DQ645742, Phytophthora sojae transposon GypsyPs-1A reverse transcriptase gene 78 90 4e–07
DM55 AY564217, Phytophthora ipomoeae 54 90 6e–32
  EU427470.1 – P. ramorum 52 89 3e–30
  AY564219 – P. andina, AY564218-P. phaseoli, AY564213 to AY564216 – P. mirabilis, AY564209 to AY003911 – P. infestans &DQ832717 and AY564221- Phytophthora sojae 54 89 3e–30
  - mitochondrion DNA    
  ES287433 and ES286374Phytophthora brassicae 54 54 88 88 2e–30 2e–29
  CV935202Phytophthora infestans (potato late blight) 54 86 1e–26
  EL774547, EL777768, EL775494, EL779446, EL781147 and EL775427Pythium ultimum    
  - ESTs,    
  1. *E value or the Expect value is a parameter that describes the number of hits one can "expect" to see just by chance when searching a database of a particular size