Maximum likelihood estimates of two-locus recombination fractions under some natural inequality restrictions

BMC Genomic Data

Table 2 Phenotype classes for phase-unknown triple backcross families with two offspring

k	(i, j)^a	p _k
1	(1,1), (2,2), (3,3), (4,4), (5,5), (6,6) (7,7), (8,8), (4,5), (3,6), (2,7), (1,8)	$g 112 + g 102 + g 012 + g 002 MathType@MTEF@5@5@+=feaagaart1ev2aaatCvAUfKttLearuWrP9MDH5MBPbIqV92AaeXatLxBI9gBaebbnrfifHhDYfgasaacPC6xNi=xH8viVGI8Gi=hEeeu0xXdbba9frFj0xb9qqpG0dXdb9aspeI8k8fiI+fsY=rqGqVepae9pg0db9vqaiVgFr0xfr=xfr=xc9adbaqaaeGacaGaaiaabeqaaeqabiWaaaGcbaGaem4zaC2aa0baaSqaaiabigdaXiabigdaXaqaaiabikdaYaaakiabgUcaRiabdEgaNnaaDaaaleaacqaIXaqmcqaIWaamaeaacqaIYaGmaaGccqGHRaWkcqWGNbWzdaqhaaWcbaGaeGimaaJaeGymaedabaGaeGOmaidaaOGaey4kaSIaem4zaC2aa0baaSqaaiabicdaWiabicdaWaqaaiabikdaYaaaaaa@3FE7@$
2	(1,2), (3,4), (3,5), (1,7), (4,6), (2,8), (5,6), (7,8)	2(g₁₁g₁₀ + g₀₁g₀₀)
3	(2,3), (1,4), (1,5), (2,6), (3,7), (4,8), (6,7), (5,8)	2(g₁₁g₀₁ + g₁₀g₀₀)
4	(1,3), (2,4), (2,5), (1,6), (4,7), (3,8), (5,7), (6,8)	2(g₁₁g₀₀ + g₁₀g₀₁)
Total		1

^a(i, j): i and j refer to the code of haplotype in Table 1, corresponding to a phenotype each.

ISSN: 2730-6844