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Table 5 QTL detected for chalkiness traits in population ZS97/WYJ

From: Comparative mapping of chalkiness components in rice using five populations across two environments

Traita Chrb Interval QTL Wuhan
LOD Addc % Vard
CR      
  2 RM263-RM221 qCR2-W- 3.3 -6.63 8.7
  4 RM335-MRG5943 qCR4-W- 3.9 -5.30 6.9
  7 RM82-RM125 qCR7-W- 3.4 -6.06 7.3
  9 RM296-RM285 qCR9-W+ 3.8 6.28 7.8
CA      
  3 MRG2803-RM282 qCA3-W- 5.4 -4.15 8.6
  6 RM190-RM510 qCA6-W+ 3.9 3.47 6.0
  9 RM285-MRG6094 qCA9-W+ 3.6 3.20 5.1
WCR      
  3 RM36-MRG0002 qWCR3-1W- 9.0 -12.56 14.3
  3 RM130-RM570 qWCR3-2W- 3.1 -6.90 4.3
  4 RM335-MRG5943 qWCR4-1W- 13.8 -14.17 18.2
  4 RM142-RM177 qWCR4-2W+ 3.2 8.09 6.3
  4 RM252-RM241 qWCR4-3W+ 10.4 11.92 12.9
  8 RM80-RM149 qWCR8-W- 4.3 -9.29 8.3
  9 RM285-MRG6094 qWCR9-W+ 8.6 12.40 13.9
WBR      
  1 RM84-RM283 qWBR1-1W- 4.1 -8.59 7.7
  1 RM129-RM9 qWBR1-2W+ 4.2 8.08 6.8
  5 RM87-RM334 qWBR5-W+ 2.5 6.09 3.9
  8 RM152-RM38 qWBR8-W- 13.3 -14.04 17.6
  9 RM296-RM285 qWBR9-W+ 7.6 10.73 10.3
  11 RM536-RM287 qWBR11-W- 8.0 -10.29 9.4
WCA      
  1 RM259-RM312 qWCA1-W+ 3.8 4.01 13.8
  4 RM335-MRG5943 qWCA4-W- 4.4 -3.88 12.8
WBA      
  1 RM84-RM283 qWBA1-W- 2.5 -2.64 7.1
  7 RM505-RM18 qWBA7-W- 2.0 -2.53 6.5
  8 RM210-RM80 qWBA8-W+ 3.0 2.61 8.0
  11 RM536-RM287 qWBA11-W- 4.8 -3.95 15.9
  1. aCR, chalkiness rate; CA, chalkiness area; WCR, white core rate; WBR, white belly rate; WCA, white core area; WBA, white belly area.
  2. bChr, chromosome.
  3. cThe additive effects caused by QTL; the positive value indicates that the ZS97 allele increase the trait score, while the negative value indicates that the ZS97 allele decrease the trait score.
  4. dThe phenotypic variation explained by QTL.