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Table 3 Haplotypes in PRKAG3 and their frequencies

From: A combination of two variants in PRKAG3is needed for a positive effect on meat quality in pigs

 

1

2

3

4

5

6

7

8

9

10

11

12

Wild boar

ASGA0070625

G

G

G

G

A

A

A

A

A

A

A

A

 

g.-311A > G

A

A

A

A

A

A

A

G

G

G

G

G

A

g.-221G > A

G

G

G

G

G

G

G

A

A

A

A

A

G

g.-157C > G

C

C

C

C

G

G

G

G

G

G

G

G

C

g.-58A > G

A

A

A

A

G

G

G

G

G

G

G

G

A

K24E

G

G

G

G

A

G

G

A

A

A

A

A

G

T30N

C

C

C

C

A

A

A

C

C

C

C

A

C

I41V

G

G

G

G

G

G

G

A

A

A

G

G

G

G52S

A

G

G

A

G

G

G

G

G

G

G

G

G

K131R

A

A

A

A

A

A

A

G

G

G

A

A

A

P134L

C

C

C

C

C

C

C

T

T

T

C

C

C

I199V

G

A

G

A

G

A

G

A

G

G

G

G

G

Yorkshire

0.418

0.363

0.007

0.007

0.002

0.002

0.007

0.080

0.087

0.027

0

0

 

Landrace

0.122

0.249

0.341

0

0.124

0

0

0.041

0.116

0

0.002

0.004