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Table 3 Number of recombination events calculated by different methods

From: Evolutionary history of black grouse major histocompatibility complex class IIB genes revealed through single locus sequence-based genotyping

Locus No. of sequences RM RDP GENECONV Maxchi Chimera GARD ρ θ ρ/θ
BLB1125 6 4 0 0 2 1 2 5.45 12.26 0.44
BLB2125 7 3 0 0 1 0 1 4.02 7.76 0.52
BLB2251 9 6 0 1 1 1 0 1.37 13.61 0.10
BLB1&2125 12 6 0 0 2 1 1 11.42 9.27 1.23
  1. RM, RDP, GENECONV, Maxchi, Chimaera and number of recombination breakpoints calculated GARD. Recombination rate (ρ), mutation rate (θ) and the ratio (ρ/θ) were calculated using LDhat.
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BMC Genomic Data

ISSN: 2730-6844

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