From: Detection of quantitative trait loci affecting serum cholesterol, LDL, HDL, and triglyceride in pigs
SSC | Traits | POS (cM) | PCB at peak | HCHR | QTL in human | HCBP | Putative candidate genes | Mouse strain | QTL mouse peak |
---|---|---|---|---|---|---|---|---|---|
1 | CT* | 80 | 1q1.3 - 1.4 | 18q21 15q21-22 | CT | 18q21 [51] | (B6 × C3H) F2 (B6 × DBA/2) F2 (B6 × CAST/2) F2 (B6 × C3H) F2 | 18-40cM 18-46cM 18-47cM 18-48cM | |
1 | HDL/LDL** | 87 | 1q1.5-1.6 |  | HDL |  | (B6 × 129) F2 | 2-90 cM | |
1 | LDL*** | 82 | 1q1.3 - 1.4 | Â | LDL-ApoB1 | 18q21.32 [58] | Â | Â | Â |
2 | TG | 205 | 2q2.8-2.9 | 5q23-31 | TG | 5 q21.3 -q32 [59] | STARD4[60] | Â | Â |
2 | HDL*# | 118 | 2p1.2- 2q1.2 | 11q13 | HDL | 11q12-13 [31] | CILP, PBX4 | (MRL × SJL) F2 (B6 × C3H) F2 | 7-10 cM 7-19 cM |
3 | HDL* | 0 | 3p1.5-p1.4 | 7q11 | HDL TC | 7q11.23 [61] 7q11.23 [62] | FABP1 | (NZB × SM) F2 NZO × (SJL × NZO) (B6 × CAST) F2 | 5-61.cM 5-69cM 5-72 CM |
4 | HDL/LDL* | 58 | 4q1.4-1.5 | 1q22-25 | HDL | 1q21-23 [63] 1q23-25 [64]; | FABP5[69] | (B6 × NZB11) F2 | 1-91 CM |
6 | CT* | 99 | 6q2.3 - 2.4 | 1p36.3-36.1 | LDL | 1q36.31 [63] 1q36.13 [70] | NR1H2 WWOX [71] LDLRAP1 | Â | Â |
6 | TG* | 66 | 6q1.1 - 2.1 | 19q13 | LDL, TG | 19 q12 39 cM [72] | APOE [74]; ANGPTL3 | Â | Â |
7 | CT, LDL* | 70 | 7q1.4-71.5 | 15q24-28 | LDL | 15q26.1 [51] | STARD5 | Â | Â |
11 | TG*# | 28 | 11p1.1 -1.2 | 13q12 -24 | TG and HDL | 13q13 [75] | Â | Â | Â |
12 | CT** | 36 | 12p1.3-q1.2 | 17q21-25 | CT/HDL | 17q24 [76] | WIPI1, | Â | Â |
12 | LDL* | 38 | Â | Â | LDL | THRA PEMT | Â | Â | |
13 | LDL* | 97 | 13q3.3 -3.5 | 3p31-21 | LDL | 3p25 [72] | (C56BL/6JxDBA/2J) | 3-27cM [80] | |
16 | HDL* | 81 | 16q1.4-2.1 | 5p14 -12 | HDL | 5p13.3 [81] 5p15.13 [82] | Â | (PERAxDBA/2) F2 (PERAxI) F2 | 11-28 cM 11-28 cM |
16 | HDL/LDL* | 47 | 16q1.3-1.4 | 5p14 -12 | LDL | 5p15.33 [64] | Â | Â | Â |
17 | TG*# | 72 | 17q2.2-2.3 | 13q13 | TG and HDL | 13q13 [75] | ACSS, PLTP | Â | Â |