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Table 1 Overview of all data files/data sets

From: Draft genome and transcriptome of Nepenthes mirabilis, a carnivorous plant in China

Label

Name of data file/data set

File types

(file extension)

Data repository and identifier (DOI or accession number)

Data file 1

Figure 1 A scheme chart to show the steps of genome assembly

Image file (.tif)

Figshare, https://doi.org/10.6084/m9.figshare.22336990 [18]

Data file 2

Raw WGS reads

Fastq file (.fastq)

NCBI Sequence Read Archive, https://identifiers.org/ncbi/ insdc.sra:SRR21047306 [23]

Data file 3

Raw RNA reads of leaf tissues

Fastq file (.fastq)

NCBI Sequence Read Archive, https://identifiers.org/ncbi/ insdc.sra:SRR21674160 [24]

Data file 4

Raw RNA reads of flower tissues

Fastq file (.fastq)

NCBI Sequence Read Archive, https://identifiers.org/ncbi/ insdc.sra:SRR21674159 [25]

Data file 5

Figure 2 Genome size estimation by

a) KmerGenie, b-l) GenomeScope

Image file (.tif)

Figshare, https://doi.org/10.6084/m9.figshare.22336996 [26]

Data file 6

Transcriptome assembly

Fasta file (.fasta)

Figshare, https://doi.org/10.6084/m9.figshare.22336999 [27]

Data file 7

ORF- nucleotide sequences

Fasta file (.fasta)

Figshare, https://doi.org/10.6084/m9.figshare.22337008 [28]

Data file 8

ORF- translated sequences

Fasta file (.fasta)

Figshare, https://doi.org/10.6084/m9.figshare.22337200 [29]

Data file 9

BUSCO assessment of transcriptome assembly

Text (.txt)

Figshare, https://doi.org/10.6084/m9.figshare.22337203 [30]

Data file 10

Figure 3 Summary of GO annotation of open reading frames for the Nepenthes mirabilis transcriptome

Image file (.tif)

Figshare, https://doi.org/10.6084/m9.figshare.22337206 [31]

Data file 11

GO annotation of open reading frames for the Nepenthes mirabilis transcriptome

Text (.txt)

Figshare, https://doi.org/10.6084/m9.figshare.22337209 [32]

Data file 12

Pfam annotation of open reading frames for the Nepenthes mirabilis transcriptome

Text (.txt)

Figshare, https://doi.org/10.6084/m9.figshare.22337212 [33]

Data file 13

Assembled genome

Fasta file (.fasta)

NCBI Nucleotide,

https://identifiers.org/nucleotide:JAODPA000000000.1 [34]

Data file 14

BUSCO assessment for genome assembly

Text (.txt)

Figshare, https://doi.org/10.6084/m9.figshare.22337215 [35]

Data file 15

Repeat annotation in the genome assembly

Text (.bed)

Figshare, https://doi.org/10.6084/m9.figshare.22337218 [36]

Data file 16

Predicted gene

Gff3 file (.gff3)

Figshare, https://doi.org/10.6084/m9.figshare.22337221 [37]

Data file 17

Predicted genes - nucleotide sequences

Fasta file (.fasta)

Figshare, https://doi.org/10.6084/m9.figshare.22337224 [38]

Data file 18

Predicted genes - translated sequences

Fasta file (.fasta)

Figshare, https://doi.org/10.6084/m9.figshare.22337227 [39]

Data file 19

Gene annotation using GO, Pfam, interPro and UniProt databases

Text (.txt)

Figshare, https://doi.org/10.6084/m9.figshare.22337230 [40]

Data file 20

Gene annotation from eggNOG-mapper analysis

Text (.txt)

Figshare, https://doi.org/10.6084/m9.figshare.22337236 [41]