BMC Genomic Data

Table 3 CAI value of various pancreatitis associated and housekeeping genes

From: An investigation of codon usage pattern analysis in pancreatitis associated genes

	GENE	CAI	GENE	CAI	GENE	CAI
Pancreatitis genes	APC	0.699	CFTR	0.694	PALB2	0.697
	APOA5	0.83	CPA1	0.839	PMS2	0.74
	APOC2	0.759	CTRC	0.836	PRSS1	0.829
	ATM	0.675	EPCAM	0.712	SMAD4	0.712
	BMPR1A	0.711	GPIHBP1	0.842	SPINK1	0.734
	BRCA1	0.715	MEN1	0.823	STK11	0.835
	BRCA2	0.691	MLH1	0.751	TP53	0.798
	CASR	0.808	MSH2	0.694	VHL	0.77
	CDKN2A	0.676	MSH6	0.716	-	-
Housekeeping genes	AKAP9	0.707	ACAD9	0.806	FLNA	0.84
	ABCD3	0.711	DDB1	0.81	UBC	0.842
	ABCB7	0.715	CD63	0.81	SCYL1	0.843
	ZFR	0.719	JAGN1	0.811	ALDOA	0.844
	CTNNB1	0.722	BCAP31	0.811	PTOV1	0.847
	AGPS	0.724	HAGH	0.812	CSTB	0.847
	ALG8	0.726	ALAD	0.813	IRAK1	0.849
	PABPC1	0.726	HDAC1	0.813	AHCY	0.85
	DLG1	0.727	YY1	0.814	BSG	0.85
	LDHA	0.728	PYCR2	0.817	PURA	0.85
	COPA	0.78	AKAP8	0.818	JUP	0.853
	PGK1	0.78	RPL11	0.819	RPL19	0.853
	HNRNPA1	0.78	ABCF1	0.82	CTSD	0.856
	MGP	0.782	DAG1	0.82	INF2	0.857
	MLH1	0.782	CTTN	0.822	AIP	0.862
	ACOX1	0.784	VIM	0.822	CHST12	0.862
	AFF4	0.787	TAB1	0.823	COMT	0.864
	FECH	0.787	ARAF	0.823	CD151	0.865
	RPS27A	0.787	AK2	0.825	ADIPOR1	0.867
	AAAS	0.788	PKD1	0.826	STUB1	0.868
	GSTO1	0.789	KAT5	0.827	CD81	0.874
	LARS2	0.79	SERPINA3	0.827	AKT1	0.876
	FUS	0.79	HSPB1	0.829	UBTF	0.877
	GCLC	0.791	CIC	0.83	ACTG1	0.886
	ACVR1B	0.793	FIBP	0.83	BTG2	0.886
	INTS3	0.793	CCR9	0.831	ACTB	0.897
	NPC2	0.793	FTSJ1	0.832	DDX17	0.742
	B2M	0.793	CCND2	0.833	TXLNG	0.75
	ILK	0.795	GALNS	0.835	CDK13	0.758
	CHST7	0.8	SIL1	0.835	ACOT9	0.761
	ELAC2	0.8	POLR1C	0.837	ACBD3	0.768
	ZXDA	0.802	NCOR2	0.837	RUFY1	0.774
	NDUFA4	0.804	CLU	0.837	-	-

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