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Table 1 Comparison of KMN1 nucleotide substitutions with the consensus sequences of GIX.1[GII.P15] strains

From: Identification and genetic characterization of a minor norovirus genotype, GIX.1[GII.P15], from China

Gene

p48

             

 Position

170

251

285

420

504

657

723

735

819

831

834

843

855

900

 Consensus

C

A

G

C

A

C

C

C

G

G

G

C

A

A

 KMN1

T

G

A

T

G

T

T

T

A

T

A

A

G

G

Gene

 

NTPase

           

p22

 Position

906

63

69

306

345

489

615

660

663

744

924

930

957

144

 Consensus

C

A

T

C

C

T

C

A

C

G

C

C

G

A

 KMN1

T

G

C

T

T

G

T

G

T

A

T

T

A

G

Gene

   

VPg

       

Pro

  

 Position

150

432

441

18

24

57

108

162

277

330

342

9

24

150

 Consensus

C

A

G

C

G

C

G

T

G

C

T

G

C

T

 KMN1

T

G

T

T

A

T

A

C

A

T

C

A

T

C

Gene

    

Pol

         

 Position

252

306

483

541

21

174

177

504

564

634

639

807

810

846

 Consensus

T

C

A

T

A

A

C

A

C

A

G

G

A

G

 KMN1

C

T

G

C

G

G

T

G

T

G

A

A

G

A

Gene

       

VP1

      

 Position

1059

1095

1098

1284

1314

1344

1395

102

174

240

255

366

417

465

 Consensus

G

T

A

G

C

G

G

G

G

A

A

T

A

C

 KMN1

A

C

G

A

T

A

A

A

A

G

G

C

T

T

Gene

              

 Position

651

676

687

840

864

903

904

921

972

1092

1167

1191

1284

1287

 Consensus

G

T

T

C

T

C

C

A

C

C

A

T

A

A

 KMN1

A

C

C

T

C

T

T

G

T

T

G

C

G

G

Gene

    

VP2

         

 Position

1395

1452

1485

1545

138

315

330

491

558

621

663

687

  

 Consensus

T

A

T

A

C

T

A

C

C

C

T

A

  

 KMN1

C

G

C

G

T

C

G

T

T

T

C

G

  
  1. Positions in bold represent nucleotide changes that resulted in changes in the amino acid sequence
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BMC Genomic Data

ISSN: 2730-6844

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