Mitochondria in tumour progression: a network of mtDNA variants in different types of cancer

BMC Genomic Data

Table 1 Statistical test summary for shared variants between GC and the other types of cancer

CT1	CT2	JC	N	P-value	Variants
GC	Breast-AdenoCA	0.006	4	***	16,189\|16,278\|7028\|73
GC	Liver-HCC	0.007	8	***	10,810\|11,914\|12,705\|14,560\|16,111\|16,360\|16,519\|16,527
GC	Stomach-AdenoCA	0.004	1	***	16,311
GC	Lung-SCC	0.005	1	**	11,719
GC	Prost-AdenoCA	0.011	8	**	11,914\|13,789\|1438\|16,111\|16,189\|16,278\|16,327\|73
GC	Panc-AdenoCA	0.008	6	**	11,914\|15,043\|16,111\|16,129\|16,278\|16,327
GC	Kidney-RCC	0.014	8	**	10,810\|11,914\|12,705\|14,178\|16,111\|16,311\|16,527\|9545
GC	ColoRect-AdenoCA	0.007	2	**	13,650\|2706
GC	Eso-AdenoCA	0.011	5	**	11,914\|16,093\|16,111\|16,223\|16,311
GC	Lymph-CLL	0.011	2	**	16,327\|3594
GC	Kidney-ChRCC	0.011	3	**	16,129\|16,189\|8584
GC	Cervix-SCC	0.010	1	*	11,914
GC	Uterus-AdenoCA	0.015	3	*	14,560\|16,093\|16,189
GC	CNS-Medullo	0.014	3	*	10,873\|16,360\|16,519
GC	Ovary-AdenoCA	0.009	4	*	11,914\|14,560\|16,111\|16,189
GC	Breast-LobularCA	0.011	1	*	489
GC	Head-SCC	0.015	3	*	13,650\|16,519\|7028
GC	Thy-AdenoCA	0.014	3	*	16,129\|16,223\|3666
GC	SoftTissue-Leiomyo	0.012	1	*	16,527
GC	CNS-Oligo	0.011	1	*	16,223
GC	Panc-Endocrine	0.009	2	*	16,527\|3666
GC	Lymph-BNHL	0.016	4	*	11,914\|14,560\|16,189\|3666

CT Cancer Type (1 and 2), JC Jaccard index, N Number of found variants. Statistical significance: * not significant (P value > 0.01); ** (P value < 0.01); *** (P value ≤ 0.000001)

ISSN: 2730-6844