Table 4 Number of alleles (Na), allelic richness (AR), expected (He) and observed (Ho) heterozygosities per loci in the four subpopulations of Djallonké sheep
From: Morphological and microsatellite DNA diversity of Djallonké sheep in Guinea-Bissau
Loci | Bafatá | Cacheu | Gabú | Oio | All populations | |
|---|---|---|---|---|---|---|
ILSTS5 | Na | 6 | 5 | 8 | 6 | 8 |
AR | 4.18 | 4.15 | 4.85 | 4.16 | 4.49 | |
He | 0.794 | 0.804 | 0.845 | 0.788 | ||
Ho | 0.692 | 0.714 | 0.895 | 0.938 | ||
OarCB226 | Na | 7 | 5 | 6 | 6 | 8 |
AR | 3.23 | 3.52 | 3.39 | 3.24 | 3.37 | |
He | 0.591 | 0.706 | 0.643 | 0.598 | ||
Ho | 0.591 | 0.800 | 0.556 | 0.625 | ||
OarFCB193 | Na | 7 | 5 | 7 | 6 | 9 |
AR | 4.11 | 3.49 | 4.05 | 4.22 | 4.03 | |
He | 0.774 | 0.701 | 0.760 | 0.791 | ||
Ho | 0.500 | 0.800 | 0.800 | 0.652 | ||
OarFCB304 | Na | 7 | 5 | 6 | 6 | 9 |
AR | 4.04 | 3.43 | 3.97 | 2.46 | 3.68 | |
He | 0.780 | 0.664 | 0.777 | 0.369 | ||
Ho | 0.654 | 0.333 | 0.704 | 0.333 | ||
ILSTS11 | Na | 3 | 3 | 4 | 5 | 6 |
AR | 2.40 | 2.69 | 2.83 | 2.76 | 2.76 | |
He | 0.574 | 0.549 | 0.627 | 0.590 | ||
Ho | 0.200 | 0.533 | 0.316 | 0.458 | ||
MCM140 | Na | 7 | 6 | 7 | 6 | 9 |
AR | 4.49 | 4.25 | 4.40 | 3.80 | 4.29 | |
He | 0.817 | 0.802 | 0.809 | 0.715 | ||
Ho | 0.842 | 0.933 | 0.815 | 0.708 | ||
OarJMP58 | Na | 4 | 4 | 3 | 5 | 8 |
AR | 4.00 | 2.70 | 3.00 | 3.20 | 3.49 | |
He | 0.750 | 0.487 | 0.733 | 0.693 | ||
Ho | 0.750 | 0.467 | 0.400 | 0.783 | ||
SRCRSP1 | Na | 4 | 3 | 3 | 3 | 4 |
AR | 2.76 | 2.09 | 2.62 | 2.63 | 2.57 | |
He | 0.535 | 0.301 | 0.553 | 0.531 | ||
Ho | 0.300 | 0.200 | 0.630 | 0.583 | ||
MAF214 | Na | 3 | 3 | 3 | 3 | 3 |
AR | 2.82 | 2.65 | 2.79 | 2.52 | 2.70 | |
He | 0.634 | 0.545 | 0.614 | 0.479 | ||
Ho | 0.500 | 0.667 | 0.482 | 0.609 | ||
MAF65 | Na | 5 | 4 | 4 | 4 | 6 |
AR | 3.27 | 3.26 | 3.16 | 3.26 | 3.25 | |
He | 0.690 | 0.692 | 0.698 | 0.699 | ||
Ho | 0.808 | 0.667 | 0.667 | 0.652 | ||
MAF70 | Na | 8 | 7 | 10 | 8 | 10 |
AR | 3.51 | 4.98 | 4.25 | 4.43 | 4.35 | |
He | 0.696 | 0.860 | 0.750 | 0.788 | ||
Ho | 0.560 | 0.800 | 0.769 | 0.652 | ||
OarCP34 | Na | 7 | 4 | 5 | 7 | 9 |
AR | 4.01 | 3.41 | 4.04 | 4.49 | 4.10 | |
He | 0.736 | 0.699 | 0.783 | 0.824 | ||
Ho | 0.600 | 0.733 | 0.692 | 0.913 | ||
Mean ± SD | Na | 5.67 ± 1.78 | 4.50 ± 1.24 | 5.50 ± 2.24 | 5.42 ± 1.51 | 7.42 ± 2.19 |
Mean ± SD | AR | 3.57 ± 0.67 | 3.39 ± 0.80 | 3.61 ± 0.73 | 3.43 ± 0.76 | 3.59 ± 0.67 |
Mean ± SD | He | 0.697 ± 0.094 | 0.651 ± 0.157 | 0.716 ± 0.089 | 0.655 ± 0.143 | 0.680 ± 0.032 |
Mean ± SD | Ho | 0.583 ± 0.192 | 0.637 ± 0.215 | 0.644 ± 0.176 | 0.659 ± 0.169 | 0.631 ± 0.033 |