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Table 2 A summary of the broomcorn millet BESs and the anchoring results of the broomcorn millet BAC clones to the longmi 4 genome using the BESs

From: Genomic resources of broomcorn millet: demonstration and application of a high-throughput BAC mapping pipeline

Categories Short BESs Long BESs Integrity
BAC end sequences
 Clones in superpool 9216 9216  
 Clones with successful BESs 9126 7725  
  Clones with paired BESs 7790 3890  
  Clones with single-end BESs 1336 3835  
   Clones with only forward BES 921 2189  
   Clones with only reverse BES 415 1646  
 Total successful BESs 17,811 (96.63%) 12,721 (66.17%)  
Alignment
 Aligned BESs with repeats unmasked 14,862 (83.44%) 12,120 (95.28%)  
  Single-hit BESs 12,971 12,120  
  Multi-hit BESs 1891 0  
 Aligned BESs with repeats masked 7760 (43.57%) 10,626 (83.53%)  
  Single-hit BESs 7295 10,626  
  Multi-hit BESs 465 0  
Anchoring to reference sequences
 Clones anchored to single sites 5795 6973 8262
  Clones anchored with single BES 2507 3907 2871
  Clones anchored with paired BESs 3288 3066 5391