Skip to main content
Fig. 2 | BMC Genomic Data

Fig. 2

From: The performance of common SNP arrays in assigning African mitochondrial haplogroups

Fig. 2

L0-L3 haplogroup assignment performance for eight different SNP arrays. The percentage of haplogroups that could be assigned compared to the full mitochondrial genome is shown for L0-L3. Only clades with a minimum bootstrapping value of 50 were used for the analysis. The different colours indicate the eight SNP arrays. When interested in a specific African haplogroup or a population carrying a specific haplogroup in high frequency, this SNP array analysis can guide researchers in assessing if mitochondrial haplogroup assignment using the particular SNP array will be informative. Up to four-digit haplogroups have been investigated (for example L0, L0d, L0d1). The numbers underneath each haplogroup indicate on how many sequences the analysis for that haplogroup is based

Back to article page