Fig. 1
From: The performance of common SNP arrays in assigning African mitochondrial haplogroups
Percentage of assignable mitochondrial haplogroups per SNP array, compared to the full mitochondrial genome. The various SNP arrays are listed on the x-axis. Only clades with a minimum bootstrapping value of 50 were used for the analysis. The two shades represent the level of haplogroup assignment that has been investigated. Darker shades indicate that haplogroups up to the level of three digits (e.g. L0d) have been investigated. Lighter shades indicate that haplogroups up to the level of four digits (e.g. L0d1) have been investigated. Haplogroup assignments from phylogenetic trees based on full mitochondrial genomes were the golden standard. SNP array 5 and 6 show the best performance on African haplogroup assignment