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Table 7 Accuracy after exclusion of different subsets of LQ28 markers from construction of the genomic relationship matrix

From: Dissection of the impact of prioritized QTL-linked and -unlinked SNP markers on the accuracy of genomic selection1

 

Excluded markersb

Exclusion criteriaa

None

Top 50 k

Bottom 50 k

Effects

0.62

0.68

0.62

FST Scores

0.62

0.65

0.63

  1. a Markers were excluded from the LQ28 subset based either of their FST scores or effects; b All markers were included (None), top 50 k markers excluded (Top 50 k), and bottom 50 k markers excluded (Bottom 50 k)