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Table 2 Comparative analysis of gene expression regulation of secondary metabolites biosynthesis in fruits, roots and leaves

From: Comparative transcriptome analysis of Alpinia oxyphylla Miq. reveals tissue-specific expression of flavonoid biosynthesis genes

Group

ROOT

Second

mapID

Description

DEGs

up-gene in Fruit

down-gene in fruit

root vs fruit

metabolism

biosynthesis of other secondary metabolites

map00940

phenylpropanoid biosynthesis

35

14

3

map00942

anthocyanin biosynthesis

2

0

map00945

stilbenoid, diarylheptanoid and gingerol biosynthesis

0

3

metabolism of terpenoids and polyketides

map00909

sesquiterpenoid and triterpenoid biosynthesis

1

2

leaf vs fruit

metabolism

biosynthesis of other secondary metabolites

map00940

phenylpropanoid biosynthesis

44

19

5

map00941

flavonoid biosynthesis

8

0

map00950

isoquinoline alkaloid biosynthesis

7

0

metabolism of terpenoids and polyketides

map00906

carotenoid biosynthesis

0

5