Skip to main content

Table 4 Functional annotation of the potential candidate genes for the four plant architecture-related traits and 100-SW in soybean

From: Genome-wide association studies of plant architecture-related traits and 100-seed weight in soybean landraces

Traits Candidate genes Function annotation
PH Glyma.05 g030900 Pentatricopeptide repeat (PPR) superfamily protein
Glyma.14 g194100 zinc finger (CCCH-type) family protein
Glyma.14 g194400 Pentatricopeptide repeat (PPR-like) superfamily protein
Glyma.14 g194600 ATNDI1, NDA1|alternative NAD(P)H dehydrogenase 1
NN Glyma.19 g128800 PIN1, ATPIN1|Auxin efflux carrier family protein
Glyma.19 g129100 TTF-type zinc finger protein with HAT dimerisation domain
BN Glyma.06 g294700 GDSL-like Lipase/Acylhydrolase superfamily protein
DI Glyma.10 g210500 GATA transcription factor 9
Glyma.10 g210600 ARF16|auxin response factor 16
Glyma.10 g211000 PIP2B, PIP2;2|plasma membrane intrinsic protein 2
Glyma.10 g212200 UBC19|ubiquitin-conjugating enzyme19
100-SW Glyma.05 g127900 Small nuclear ribonucleo protein family protein
Glyma.05 g128000 Chlorophyll A/B binding protein 1
Glyma.05 g129000 HMG-box (high mobility group) DNA-binding family protein
Glyma.05 g129400 basic helix-loop-helix (bHLH) DNA-binding superfamily protein