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Table 3 Genomic regions associated with vulva size traits by breed

From: Genetic and genomic characterization of vulva size traits in Yorkshire and Landrace gilts

Breed

Traita

SSCb

Mbc

No. of SNPd

%TGVMe

PPIf

Landrace

VA

2

154–157

119

12.9

0.90

 

7

107–110

64

14.0

0.73

 

8

4–6

112

11.1

0.76

 

10

8–19

355

4.7

0.61

 

VH

2

154–157

119

6.2

0.63

 

7

107–110

64

13.5

0.70

 

10

8–19

355

8.7

0.75

 

VW

2

154–157

119

15.8

0.79

 

8

4–6

112

10.3

0.64

Yorkshire

VA

1

282–287

154

4.7

0.58

 

VH

1

87–91

64

4.8

0.54

 

1

282–287

154

3.4

0.50

 

5

67

34

6.8

0.70

 

VW

1

282–287

154

6.9

0.68

  1. aVA vulva area, VH vulva height, VW vulva width;
  2. bSus scrofa chromosome;
  3. cMegabase location of the SNP window;
  4. dNumber of SNPs in the SNP window;
  5. eTotal genetic variance accounted for by the markers;
  6. fPosterior probability of inclusion of the SNP window
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BMC Genomic Data

ISSN: 2730-6844

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