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Table 1 Location, sample size and genetic diversity of the samples included in this study

From: The maternal origin of indigenous domestic chicken from the Middle East, the north and the horn of Africa

Country/population N S H Hd (SD) π (SD) K
Iraqi populations
North-East
 Sulimania [1] 9 0 1 0 (0) 0 (0) 0
Central
 Baghdad 51 18 12 0.725 (0.053) 0.0080 (0.0009) 3.167
 Karbala 12 5 4 0.712 (0.105) 0.0043 (0.0010) 1.697
 Central [2] 63 20 14 0.736 (0.051) 0.0075 (0.0008) 2.988
South
 Basra 11 1 2 0.182 (0.144) 0.0005 (0.0003) 0.182
 Misan 24 11 5 0.438 (0.121) 0.0034 (0.0015) 1.359
 South [3] 35 12 6 0.361 (0.103) 0.0025 (0.0011) 1.002
Total 107 22 18 0.686 (0.047) 0.0067 (0.0007) 2.652
Algerian populations
North-West
 Mascara 20 3 4 0.363 (0.131) 0.0010 (0.0004) 0.389
 Oran 17 5 6 0.706 (0.106) 0.0022 (0.0005) 0.882
 Tiaret 11 2 2 0.182 (0.144) 0.0009 (0.0007) 0.364
 Tlemcen 18 15 8 0.797 (0.088) 0.0056 (0.0021) 2.242
 North-West [1] 66 19 12 0.569 (0.072) 0.0025 (0.0007) 1.030
Central
 Adrar [2] 22 5 4 0.654 (0.085) 0.0035 (0.0006) 1.403
Total 88 20 13 0.597 (0.060) 0.0028 (0.0006) 1.145
Ethiopian populations
North
 Mihquan 10 9 3 0.644 (0.101) 0.0054 (0.0031) 2.156
 Meseret 10 11 6 0.867 (0.085) 0.0072 (0.0026) 2.844
 North [1] 20 14 7 0.742 (0.071) 0.0061 (0.0021) 2.447
Central-East
 Adane 10 11 5 0.800 (0.100) 0.0082 (0.0029) 3.244
 Arabo 10 4 5 0.844 (0.080) 0.0033 (0.0006) 1.289
 Horro 30 10 5 0.644 (0.081) 0.0068 (0.0017) 2.699
 Jarso 14 0 1 0 (0) 0 (0) 0
 Midir 10 2 3 0.600 (0.131) 0.0017 (0.0005) 0.667
 Negasi_Amba 10 1 2 0.467 (0.132) 0.0012 (0.0003) 0.467
Central-East [2] 84 20 10 0.774 (0.027) 0.0092 (0.0010) 3.674
West
 Ashuda 10 1 2 0.356 (0.159) 0.0009 (0.0004) 0.356
 Amshi 10 1 2 0.533 (0.095) 0.0013 (0.0002) 0.533
 Batambie 8 1 2 0.250 (0.180) 0.0006 (0.0004) 0.250
 Dikuli 10 2 3 0.600 (0.131) 0.0017 (0.0005) 0.667
 Gafera 10 1 2 0.467 (0.132) 0.0012 (0.0003) 0.467
 Surta 9 1 2 0.222 (0.166) 0.0006 (0.0004) 0.222
 Tzion_Teguaz 10 3 3 0.600 (0.131) 0.0024 (0.0009) 0.933
 West [3] 67 5 8 0.707 (0.044) 0.0025 (0.0002) 1.000
South
 Girissa 10 4 5 0.667 (0.163) 0.0027 (0.0008) 1.067
 Kumato 10 10 5 0.756 (0.130) 0.0082 (0.0030) 3.244
 Loya 10 8 5 0.756 (0.130) 0.0089 (0.0020) 3.533
 Shubi_Gemo 10 14 6 0.911 (0.062) 0.0145 (0.0020) 5.756
 South [4] 40 23 19 0.929 (0.021) 0.0150 (0.0006) 5.964
Total 211 33 36 0.840 (0.016) 0.0094 (0.0007) 3.732
Saudi Arabia
 East [1] 45 18 15 0.856 (0.044) 0.0042 (0.0008) 1.697
 Central [2] 43 20 11 0.631 (0.084) 0.0037 (0.0010) 1.499
 West [3] 97 23 16 0.702 (0.041) 0.0041 (0.0006) 1.658
Total 185 34 26 0.727 (0.033) 0.0041 (0.0005) 1.633
Other populations
Libya 23 14 10 0.731 (0.099) 0.0054 (0.0018) 2.142
Pakistan 92 24 19 0.756 (0.043) 0.0088 (0.001) 3.503
Total
All the samples included in this study 706 55 88 0.815 (0.014) 0.0077 (0.0004) 3.058
  1. N = number of samples, S = segregating sites, H = Number of haplotypes, Hd (SD) = haplotype diversity (standard deviation), π (SD) = nucleotide diversity (standard deviation) and K = average number of nucleotide differences