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Table 4 SSR marker loci associated with SRUE (PVE > 5%) and percentage of phenotypic variation explained by the locus derived from 266 markers and 506 rice accessions

From: Mining of favorable alleles for seed reserve utilization efficiency in Oryza sativa by means of association mapping

No#MarkerChromPosition (cM)20162017
P ValuePVEa (%)FDRbP ValuePVEa (%)FDRb
1RM1281123.20.0035.850.0030.0035.910.003
2RM2971126.50.00912.010.0090.00911.980.009
3RM5252143.70.0076.400.0070.0076.420.007
4RM232376.70.0035.610.0030.0035.630.003
5RM3471416.70.0076.940.0070.0076.900.007
6RM58185144.90.0025.030.0020.0025.070.002
7RM73096100.30.0026.250.0010.0026.240.001
    0.0017.187.23E-040.0017.109.06E-04
8RM31386110.60.0015.200.0010.0015.210.001
9RM3589789.80.0025.490.0020.0025.510.002
10RM2818128.10.0065.620.0060.0075.550.007
11RM434957.70.0025.240.0010.0025.220.002
    0.0035.512.82E-030.0035.522.73E-03
12RM1841041.60.0097.200.0090.0087.320.008
13RM57461239.40.0075.940.0070.0085.850.008
  1. *a PVE: Percentage of phenotypic variation explained
  2. b FDR, False discovery rate
  3. Markers in bold font means the common loci identified by both GLM and MLM in this study and the rest by GLM only