Table 4 Comparison of allele type for the four QTLs for lines with high and low germination across various AG screening methods
Lines | Screen house (AG) | Tray (AG) | Screen house (NS) | Across environments | PC1 | PC2 | qAG1–2 | qAG6–2 | qAG7–4 | qAG10–1 |
|---|---|---|---|---|---|---|---|---|---|---|
IR 128754–161 | 73.4 | 72.7 | 94.0 | 80.1 | −1.7 | 1.1 | + | – | H | + |
IR 128754–165 | 70.3 | 53.4 | 94.9 | 72.9 | −0.7 | 1.6 | H | H | H | + |
IR 128754–81 | 75.1 | 54.3 | 88.1 | 72.4 | −1.1 | 2.1 | – | – | + | – |
IR 128754–51 | 70.1 | 58.0 | 83.2 | 70.4 | −1.5 | 1.8 | + | – | H | – |
IR 128754–178 | 57.2 | 70.6 | 83.3 | 70.2 | −2.1 | 0.4 | + | + | . | + |
IR 128754–86 | 4.5 | 3.6 | 86.8 | 31.5 | 1.6 | −0.9 | – | – | – | – |
IR 128754–101 | 4.8 | 0.0 | 84.4 | 29.7 | 1.7 | −0.7 | H | – | – | – |
IR 128754–102 | 10.5 | 7.0 | 70.7 | 29.5 | 0.6 | 0.0 | – | – | – | – |
IR 128754–15 | 5.9 | 0.0 | 83.2 | 29.3 | 1.7 | −0.5 | – | H | – | – |
IR 128754–136 | 0.0 | 0.0 | 62.2 | 20.4 | 0.6 | −0.2 | – | – | – | – |
NSICRc222 | 16.2 | 11.2 | 91.0 | 39.4 | 1.5 | −0.5 | – | – | – | – |
BJ1 | 50.9 | 41.2 | 92.9 | 61.6 | −0.1 | 0.8 | + | + | + | + |