Genetic analysis of rice seedling traits related to machine transplanting under different seeding densities

BMC Genomic Data

Table 3 Summary of significant additive effects and two-locus interactions under three seeding densities

Trait^a	Seeding density^b	Ex1				Ex2				Ex3
Trait^a	Seeding density^b	PAE^c	NAE^d	PEE^e	NEE^f	PAE	NAE	PEE	NEE	PAE	NAE	PEE	NEE
SH	LD	36	488	12	42	80	99	0	33	166	363	4	50
	MD	62	529	13	35	82	86	0	41	137	228	2	64
	HD	82	465	6	42	73	109	1	53	166	159	3	79
FLSL	LD	104	225	5	12	168	294	1	79	173	183	1	88
	MD	85	435	9	35	271	245	0	100	161	257	3	91
	HD	74	382	12	19	351	243	0	118	138	267	2	120
FLL	LD	0	323	22	9	0	335	8	36	0	466	15	25
	MD	0	497	16	9	0	278	25	17	0	553	18	31
	HD	0	535	11	13	0	202	3	53	0	379	6	34
SLL	LD	0	437	4	29	39	321	1	40	21	215	4	62
	MD	0	547	18	27	48	391	0	68	26	252	8	103
	HD	0	491	10	31	19	461	0	68	23	381	9	99
RDW	LD	1	425	1	26	0	650	1	5	6	125	5	11
	MD	0	345	2	4	0	184	0	3	0	99	2	9
	HD	0	471	0	18	0	300	0	12	17	83	0	2
SDW	LD	24	484	8	41	63	334	6	15	74	282	8	29
	MD	1	525	5	18	42	108	1	12	19	559	5	14
	HD	5	416	2	55	21	97	4	14	35	440	7	18

^aTrait, SH, seedling height; FLSL, first leaf sheath length; FLL, first leaf length; SLL, second leaf length; RDW, root dry weight (mg); SDW, shoot dry weight (mg). ^b Seeding density, LD, MD, and HD represented low density, medium density, and high density, respectively. ^{c, d} PAE and NAE, indicated the number of bins with positive additive effect and negative additive effect, respectively. Positive values indicate that alleles from Nip were in the direction of increasing the trait scores, and negative values indicate that alleles from 9311 are in the direction of increasing the score. ^{e, f} PEE, NEE indicated the number of two-locus interactions with significant positive and negative epistatic effects, respectively

ISSN: 2730-6844