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Table 1 Response of transcription factors to waterlogging stress

From: Transcriptomic and anatomic profiling reveal the germination process of different wheat varieties in response to waterlogging stress

Category

Gene_id

Cluster

Log2 (Fold change)

Swissprot_name

Swissprot_description

W72_ZM22 vs C72_ZM22

W72_BN207 vs C72_BN207

W72_BN607 vs C72_BN607

WRKY

TraesCS1A02G197400

C2

−0.13

−0.38

−1.55

WRKY35

WRKY transcription factor 35

TraesCS3A02G347500

C2

−0.4

− 0.57

−1.83

WRKY24

WRKY transcription factor WRKY24

TraesCS6A02G146900

C2

−0.99

−1.07

− 2.16

WRKY71

WRKY transcription factor WRKY71

TraesCS6B02G175100

C2

−0.98

−1.4

− 2.14

WRKY71

WRKY transcription factor WRKY71

TraesCS2B02G410400

C2

−0.13

− 0.61

−1.51

WRKY12

WRKY transcription factor 12

TraesCS3D02G113300

C7

−2.2

−0.49

0.15

WRKY72

WRKY transcription factor 72

MYB

TraesCS1D02G084400

C2

0.04

−0.65

−1.68

MYB86

Transcription factor MYB86

TraesCS7D02G514800

C7

−3.69

−1.34

−0.03

MYB44

Transcription factor MYB44

TraesCS2A02G157600

C7

−1.46

−0.46

0.19

MYB306

Myb-related protein 306

TraesCS2A02G116100

C7

0.7

0.78

1.03

EFM

Myb family transcription factor EFM

ERF

TraesCS2A02G288000

C7

−0.06

0.32

1.12

ERF114

Ethylene-responsive transcription factor ERF114

TraesCS1B02G392300

C7

−0.41

0.73

1.95

AP2/ERF

AP2/ERF and B3 domain-containing protein

TraesCS7A02G264100

C7

−0.2

0.39

1.08

ABR1

Ethylene-responsive transcription factor ABR1

MADS-box

TraesCS5B02G115100

C2

0.17

0.06

−2.07

MADS13

MADS-box transcription factor 13

TraesCS4D02G346300

C7

0.07

0.96

1.16

MADS51

MADS-box transcription factor 51

ZIP

TraesCS2A02G424200

C2

0.14

−0.34

−1.26

ZIP3

Zinc transporter 3

TraesCS1B02G306500

C2

−0.14

−0.34

−1.36

ZIP5

Zinc transporter 5

BHLH

TraesCS2D02G347200

C7

−1.1

−0.56

1.62

BHLH113

Transcription factor bHLH113

TraesCS5D02G411600

C7

−2.61

0.24

1.16

BHLH84

Transcription factor bHLH84

IAA

TraesCS7A02G322000

C2

−0.74

−0.99

−1.55

IAA25

Auxin-responsive protein IAA25

ARF

TraesCS3B02G190100

C2

−0.1

−0.64

−1.34

ARF1

Auxin response factor 1

HSFA

TraesCS2D02G211400

C7

−1.72

−0.81

0.53

HSFA3

Heat stress transcription factor A-3

NAC

TraesCS2A02G102000

C7

0.24

0.69

1.24

NAM-B1

NAC transcription factor NAM-B1

  1. NOTE: C72_ZM22, ZM22 after 72 h of germination under the control treatment; W72_ZM22: ZM22 after 72 h of germination under the waterlogging treatment; C72_BN207, BN207 after 72 h of germination under the control treatment; W72_BN207, BN207 after 72 h of germination under the waterlogging treatment; C72_BN607, BN607 after 72 h of germination under the control treatment; and W72_BN607, BN607 after 72 h of germination under the waterlogging treatment