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Table 1 Genetic diversity within our white-tailed deer population (nucleotide diversity and haplotype diversity) and neutrality tests for MHC-DRB exon 2 for the adult founding population [2003–2007; n = 69 (MHC-DRB), 71 (MHC-DOB extended sequence), 71 (MHC-DOB exon 2)] and the final adult population [2016; n = 118 (MHC-DRB), 119 (MHC-DOB extended sequence), 119 (MHC-DOB exon 2)]. P-values for the Hardy Weinberg Equilibrium tests are also included, which shows a statistical significance for heterozygote excess in MHC-DRB exon 2 in the 2016 population

From: Characterization of two MHC II genes (DOB, DRB) in white-tailed deer (Odocoileus virginianus)

 

MHC-DRB founding population

MHC-DRB 2016 population

Diversity

 Nucleotide diversity (π)

0.09

0.10

 Haplotype diversity

0.90

0.88

Neutrality

 Tajima’s D

0.92

1.47

 Fu and Li’s F*

2.09*

2.45*

 Fu and Li’s D*

2.39*

2.56*

 Fu’s Fs

21.98

35.02

HWE

 Probability test

0.88

0.91

 Heterozygote excess

0.70

0.05*

 Heterozygote deficit

0.30

0.95

  1. * p < 0.05
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BMC Genomic Data

ISSN: 2730-6844

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