Breeds | Mapped Reads | Total Reads | Mapping rate (%) | Coverage [x] | SNPs | Indels | Bs-SNPs | Hom | Het | Het/ Hom |
---|---|---|---|---|---|---|---|---|---|---|
Namchi | 930.8 | 935.3 | 98.9 | 102.8 | 12.74 | 1.51 | 0.91 | 5.54 | 8.10 | 1.5 |
Kapsiki | 1154.9 | 1160.6 | 99.0 | 127.6 | 10.81 | 1.34 | 0.83 | 3.42 | 8.23 | 2.4 |
W. Fulani | 1098.0 | 1103.1 | 99.0 | 121.3 | 12.99 | 1.56 | 0.95 | 5.07 | 8.87 | 1.7 |
R. Fulani | 1098.0 | 1102.2 | 99.1 | 121.3 | 13.54 | 1.62 | 1.05 | 4.73 | 9.86 | 2.1 |
Gudali | 1267.0 | 1271.1 | 99.1 | 140.0 | 13.37 | 1.62 | 1.09 | 4.77 | 9.70 | 2.0 |
N’Dama | 271.8 | 282.1 | 99.6 | 30.0 | 8.53 | 1.01 | 0.48 | 3.32 | 5.68 | 1.7 |
Brahman | 176.9 | 177.0 | 99.4 | 19.5 | 14.21 | 1.73 | 1.70 | 6.53 | 9.38 | 1.4 |
Holstein | 453.1 | 460.6 | 99.5 | 50.0 | 5.66 | 0.76 | 0.73 | 2.59 | 3.80 | 1.5 |