Table 2 Allelic variation of TaGS3-4A. The position was accounted from ATG (1)
position | location | Changzhi 6406 | Sankecun | Shannong 7859 | Kangdingxiaomai | Xingyi 4 | Youmangbaifu | Dongnong 101 | Gansu 96 | Fuzhuang 30 | Bima 4 | amino acid change |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
− 306 | 5’UTR | T | C | C | T | T | T | C | T | T | T | – |
−129 | 5’UTR | TG | CG | TG | TG | TG | TG | CA | CG | TG | TG | – |
−53 | 5’UTR | G | A | G | G | G | G | A | A | G | G | – |
70 | 1st exon | GC | AT | GC | GC | GC | GC | AT | AT | GC | GC | A/M |
200 | 1st intron | G | G | G | C | G | G | G | G | C | C | – |
250 | 1st intron | T | T | T | – | T | T | T | T | – | – | – |
331 | 1st intron | T | A | T | T | T | T | A | A | T | T | – |
354 | 1st intron | ACT | G | ACTG | ACTG | G | ACTACTG | G | G | G | G | – |
378 | 1st intron | A | G | A | A | A | A | G | G | A | A | – |
397 | 1st intron | T | T | T | T | C | T | C | T | T | T | – |
633 | 2nd intron | C | T | T | T | C | C | T | T | T | T | – |
712 | 2nd intron | A | T | T | A | A | A | T | T | A | A | – |
1140 | 2nd intron | T | T | T | T | C | T | T | C | T | T | – |
1747 | 5th exon | T | C | T | C | T | T | T | T | T | T | L/P |
1897 | 5th exon | C | C | T | C | T | T | C | C | C | C | A/V |
1976 | 3’UTR | C | C | G | C | G | G | C | C | C | C | – |
2004 | 3’UTR | C | G | C | C | C | C | G | G | C | C | – |